G280120


Basic Information

Item Value
gene id G280120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 59364984 ~ 59365196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU317762
gtcctgtgcctgttcCCAGAACCAggtctcctgtgtgtctccccagccCGGCGAGTCCTTAGTCGCCCTCCTTTCCgtagctgccagagtcgccctcctgtccggagctgccagagtcgccctcctgtccggagctgccagagtcgccctcctgtccggggcccgctgcgagggtccccaatccggggtcggcggcgagggtccccgctcctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317762 True 213 lncRNA 0.70 1 59364984 59365196

Neighbor

gene id symbol gene type direction distance location
LOC118944557 NA coding upstream 270779 59093144 ~ 59094205 (+)
abca12 abca12 coding upstream 300192 58961640 ~ 59064792 (+)
pofut2 LOC106586440 coding upstream 416360 58936477 ~ 58948624 (+)
LOC110504354 LOC106586434 coding upstream 894394 58039857 ~ 58470598 (+)
LOC118964187 NA coding upstream 1386179 57976065 ~ 57978805 (+)
LOC110505376 NA coding downstream 148249 59513445 ~ 59515061 (+)
ikzf2 LOC106586445 coding downstream 191482 59556678 ~ 59581956 (+)
erbb4b LOC106586446 coding downstream 505363 59870559 ~ 60052294 (+)
LOC110505381 NA coding downstream 902446 60267642 ~ 60269899 (+)
myl1 LOC100135947 coding downstream 912049 60277245 ~ 60286080 (+)
G280109 NA non-coding upstream 11184 59353596 ~ 59353800 (+)
G280021 NA non-coding upstream 25498 59338654 ~ 59339486 (+)
G279996 NA non-coding upstream 64556 59300025 ~ 59300428 (+)
G279977 NA non-coding upstream 87527 59276998 ~ 59277457 (+)
G279911 NA non-coding upstream 152266 59212479 ~ 59212718 (+)
G280127 NA non-coding downstream 6806 59372002 ~ 59372403 (+)
G280132 NA non-coding downstream 10785 59375981 ~ 59376294 (+)
G280137 NA non-coding downstream 15555 59380751 ~ 59380955 (+)
G280142 NA non-coding downstream 22327 59387523 ~ 59387743 (+)
G280143 NA non-coding downstream 22778 59387974 ~ 59388220 (+)
G277973 NA other upstream 1574652 57789734 ~ 57790332 (+)
G277296 NA other upstream 2100092 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 3448851 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 3464241 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 3989458 55371759 ~ 55375526 (+)
G280315 NA other downstream 687520 60052716 ~ 60054417 (+)
G281141 NA other downstream 922192 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 1375043 60740239 ~ 60757350 (+)
G281714 NA other downstream 1526328 60891524 ~ 60893778 (+)
G281996 NA other downstream 1668570 61033766 ~ 61037105 (+)

Expression


Co-expression Network