G280331


Basic Information

Item Value
gene id G280331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 59607537 ~ 59691190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU317993
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtggttttgTTCTGTGTTTTTCTCCTTGCAGCAAAAATCTAACATATCCAAACAGCTAGAAATTTGCTGTGCTATACTCCTCAAATATTCCCTCAAAATATACACAattcctgctgcagtgtgtgcaaacctggtcaagaactacaggaaacgtatgatctctgtaattgcaaacaaagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317993 True 217 lncRNA 0.40 2 59607537 59691190

Neighbor

gene id symbol gene type direction distance location
ikzf2 LOC106586445 coding upstream 25581 59556678 ~ 59581956 (+)
LOC110505376 NA coding upstream 92476 59513445 ~ 59515061 (+)
LOC118944557 NA coding upstream 513332 59093144 ~ 59094205 (+)
abca12 abca12 coding upstream 542745 58961640 ~ 59064792 (+)
pofut2 LOC106586440 coding upstream 658913 58936477 ~ 58948624 (+)
erbb4b LOC106586446 coding downstream 179369 59870559 ~ 60052294 (+)
LOC110505381 NA coding downstream 576452 60267642 ~ 60269899 (+)
myl1 LOC100135947 coding downstream 586055 60277245 ~ 60286080 (+)
LOC118964303 NA coding downstream 691484 60382674 ~ 60383352 (+)
tgfbr2l LOC106586454 coding downstream 943349 60634539 ~ 60654313 (+)
G280324 NA non-coding upstream 14137 59593130 ~ 59593400 (+)
G280240 NA non-coding upstream 130549 59474706 ~ 59476988 (+)
G280168 NA non-coding upstream 197457 59409672 ~ 59410080 (+)
G280143 NA non-coding upstream 219317 59387974 ~ 59388220 (+)
G280142 NA non-coding upstream 219794 59387523 ~ 59387743 (+)
G280950 NA non-coding downstream 369776 60060966 ~ 60061230 (+)
G280977 NA non-coding downstream 396974 60088164 ~ 60088370 (+)
G280994 NA non-coding downstream 409006 60100196 ~ 60100412 (+)
G280995 NA non-coding downstream 409586 60100776 ~ 60101155 (+)
G281024 NA non-coding downstream 435611 60126801 ~ 60127026 (+)
G277973 NA other upstream 1817205 57789734 ~ 57790332 (+)
G277296 NA other upstream 2342645 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 3691404 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 3706794 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 4232011 55371759 ~ 55375526 (+)
G280315 NA other downstream 361526 60052716 ~ 60054417 (+)
G281141 NA other downstream 596198 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 1049049 60740239 ~ 60757350 (+)
G281714 NA other downstream 1200334 60891524 ~ 60893778 (+)
G281996 NA other downstream 1342576 61033766 ~ 61037105 (+)

Expression


Co-expression Network