Gene
RNA
| Item | Value |
|---|---|
| gene id | G280877 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 59933219 ~ 60003426 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU318561 | True | 229 | lncRNA | 0.44 | 2 | 59933219 | 60003426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vwc2l | LOC106586444 | coding | downstream | 788383 | 59115416 ~ 59144836 (-) |
| LOC110520290 | myo1b | coding | downstream | 1000965 | 58775631 ~ 58932254 (-) |
| LOC110520289 | LOC106586438 | coding | downstream | 1158591 | 58766427 ~ 58774628 (-) |
| LOC110520288 | LOC106586437 | coding | downstream | 1171378 | 58743901 ~ 58761841 (-) |
| LOC118964362 | NA | coding | downstream | 1430520 | 58502557 ~ 58502699 (-) |
| cps1 | cps1 | coding | upstream | 162552 | 60165978 ~ 60253769 (-) |
| map2 | LOC106586448 | coding | upstream | 288977 | 60292403 ~ 60416303 (-) |
| kansl1l | NA | coding | upstream | 418215 | 60421641 ~ 60463431 (-) |
| LOC118944680 | tas2r8 | coding | upstream | 494148 | 60497574 ~ 60523192 (-) |
| heg1 | LOC106586449 | coding | upstream | 541678 | 60545104 ~ 60560296 (-) |
| G280796 | NA | non-coding | downstream | 109209 | 59823584 ~ 59824010 (-) |
| G280647 | NA | non-coding | downstream | 292224 | 59638628 ~ 59640995 (-) |
| G280605 | NA | non-coding | downstream | 348067 | 59584997 ~ 59585152 (-) |
| G280170 | NA | non-coding | downstream | 520055 | 59412961 ~ 59413164 (-) |
| G280139 | NA | non-coding | downstream | 550991 | 59382018 ~ 59382228 (-) |
| G280939 | NA | non-coding | upstream | 47432 | 60050858 ~ 60054435 (-) |
| G280966 | NA | non-coding | upstream | 73388 | 60076814 ~ 60077191 (-) |
| G280986 | NA | non-coding | upstream | 91189 | 60094615 ~ 60094873 (-) |
| G281005 | NA | non-coding | upstream | 103757 | 60107183 ~ 60107645 (-) |
| G281227 | NA | non-coding | upstream | 120679 | 60124105 ~ 60124308 (-) |
| G277749 | LOC106586429 | other | downstream | 2344036 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 2529644 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 2635457 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 4521732 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 4814007 | 55068639 ~ 55122013 (-) |
| G284018 | NA | other | upstream | 2711149 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 4966123 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 5010833 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 5051274 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 5231754 | 65235180 ~ 65235908 (-) |
