G280977


Basic Information

Item Value
gene id G280977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60088164 ~ 60088370 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU318662
gtacagtacaacacacacagagagccctatgggccctggtcaaagtagtgcacaacaAAGGGAATAGgcagccatttgggatgcatcctgggTTAGTTTGTTATCTCTGAGGAGTGTTTACTGGCCATTCATCACCATAATGGGAACAGCCCTCTACTAAATAACTATTCCTTTCTCAACACTATCCCAAATTGCACTCTATTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318662 True 207 lncRNA 0.44 1 60088164 60088370

Neighbor

gene id symbol gene type direction distance location
erbb4b LOC106586446 coding upstream 35870 59870559 ~ 60052294 (+)
ikzf2 LOC106586445 coding upstream 506208 59556678 ~ 59581956 (+)
LOC110505376 NA coding upstream 573103 59513445 ~ 59515061 (+)
LOC118944557 NA coding upstream 993959 59093144 ~ 59094205 (+)
abca12 abca12 coding upstream 1023372 58961640 ~ 59064792 (+)
LOC110505381 NA coding downstream 179272 60267642 ~ 60269899 (+)
myl1 LOC100135947 coding downstream 188875 60277245 ~ 60286080 (+)
LOC118964303 NA coding downstream 294304 60382674 ~ 60383352 (+)
tgfbr2l LOC106586454 coding downstream 546169 60634539 ~ 60654313 (+)
LOC110520315 ube2e3 coding downstream 1242989 61331359 ~ 61370875 (+)
G280950 NA non-coding upstream 26934 60060966 ~ 60061230 (+)
G280331 NA non-coding upstream 396974 59607537 ~ 59691190 (+)
G280324 NA non-coding upstream 494764 59593130 ~ 59593400 (+)
G280240 NA non-coding upstream 611176 59474706 ~ 59476988 (+)
G280168 NA non-coding upstream 678084 59409672 ~ 59410080 (+)
G280994 NA non-coding downstream 11826 60100196 ~ 60100412 (+)
G280995 NA non-coding downstream 12406 60100776 ~ 60101155 (+)
G281024 NA non-coding downstream 38431 60126801 ~ 60127026 (+)
G281047 NA non-coding downstream 69436 60157806 ~ 60158118 (+)
G281052 NA non-coding downstream 76109 60164479 ~ 60166148 (+)
G280315 NA other upstream 33747 60052716 ~ 60054417 (+)
G277973 NA other upstream 2297832 57789734 ~ 57790332 (+)
G277296 NA other upstream 2823272 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 4172031 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 4187421 55900194 ~ 55900743 (+)
G281141 NA other downstream 199018 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 651869 60740239 ~ 60757350 (+)
G281714 NA other downstream 803154 60891524 ~ 60893778 (+)
G281996 NA other downstream 945396 61033766 ~ 61037105 (+)
G282707 il-1rii other downstream 1869018 61957388 ~ 61964066 (+)

Expression


Co-expression Network