Gene
RNA
| Item | Value |
|---|---|
| gene id | G281082 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 60215884 ~ 60216112 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU318782 | True | 229 | lncRNA | 0.41 | 1 | 60215884 | 60216112 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| erbb4b | LOC106586446 | coding | upstream | 163590 | 59870559 ~ 60052294 (+) |
| ikzf2 | LOC106586445 | coding | upstream | 633928 | 59556678 ~ 59581956 (+) |
| LOC110505376 | NA | coding | upstream | 700823 | 59513445 ~ 59515061 (+) |
| LOC118944557 | NA | coding | upstream | 1121679 | 59093144 ~ 59094205 (+) |
| abca12 | abca12 | coding | upstream | 1151092 | 58961640 ~ 59064792 (+) |
| LOC110505381 | NA | coding | downstream | 51530 | 60267642 ~ 60269899 (+) |
| myl1 | LOC100135947 | coding | downstream | 61133 | 60277245 ~ 60286080 (+) |
| LOC118964303 | NA | coding | downstream | 166562 | 60382674 ~ 60383352 (+) |
| tgfbr2l | LOC106586454 | coding | downstream | 418427 | 60634539 ~ 60654313 (+) |
| LOC110520315 | ube2e3 | coding | downstream | 1115247 | 61331359 ~ 61370875 (+) |
| G281054 | NA | non-coding | upstream | 47442 | 60168239 ~ 60168442 (+) |
| G281052 | NA | non-coding | upstream | 49736 | 60164479 ~ 60166148 (+) |
| G281047 | NA | non-coding | upstream | 57766 | 60157806 ~ 60158118 (+) |
| G281024 | NA | non-coding | upstream | 88858 | 60126801 ~ 60127026 (+) |
| G280995 | NA | non-coding | upstream | 114729 | 60100776 ~ 60101155 (+) |
| G281128 | NA | non-coding | downstream | 46256 | 60262368 ~ 60262582 (+) |
| G281141 | NA | non-coding | downstream | 71276 | 60287388 ~ 60303967 (+) |
| G281142 | NA | non-coding | downstream | 74570 | 60290682 ~ 60292657 (+) |
| G281166 | NA | non-coding | downstream | 106041 | 60322153 ~ 60323132 (+) |
| G281197 | NA | non-coding | downstream | 163096 | 60379208 ~ 60379424 (+) |
| G280315 | NA | other | upstream | 161467 | 60052716 ~ 60054417 (+) |
| G277973 | NA | other | upstream | 2425552 | 57789734 ~ 57790332 (+) |
| G277296 | NA | other | upstream | 2950992 | 57264567 ~ 57264892 (+) |
| G275553 | LOC107595854 | other | upstream | 4299751 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 4315141 | 55900194 ~ 55900743 (+) |
| G281591 | LOC106586456 | other | downstream | 524127 | 60740239 ~ 60757350 (+) |
| G281714 | NA | other | downstream | 675412 | 60891524 ~ 60893778 (+) |
| G281996 | NA | other | downstream | 817654 | 61033766 ~ 61037105 (+) |
| G282707 | il-1rii | other | downstream | 1741276 | 61957388 ~ 61964066 (+) |
