G281142


Basic Information

Item Value
gene id G281142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60290682 ~ 60292657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU318846
ttgtttatatatttattatatattggATGTTGGACAAGCATGATTTGCCTCAAGGATGCTTGATGTATGGTGAATGTTGAGTCTGGCATCCATTCACTTTACTGAGAAAAAAAAGACGTGTTGGCGAGTAGGAACGGGCATTGTATGGGCATGGCCACGTGACTTTCTACCTATGGCAAGAAAAAGCTGCTTCTAAGCACTGAACAGAGACCACCCCACCCTATACCTGGCCCTTACCCAGATTATTTTGTGCAAACAGCTAAAGCCGATTTGGGGTCAGTGCTTCGACACCATCTAACTATTTATATACCTATCTATCTATATGCAgcataaagaaataaaaatacACCAAATACAGGTACTTGGAATGGAAATATCAAGAAAAATGGACCAAAAGTACTTTCTAAATAGTCTGTAGTTCCCTCAGGGTTGTTGTTTCTTCATTTATCTTGATGACATAGGGCAGGGTAGGCAGCTCCATCGGGCGGCGGATATGAGGCTGCTGCAGGATGGCGGTGTCTGAGTGTCTGGGCTGGGGTTGATGAGTAAGCAGGGTTGAGGAAGTCTGAGGGCTGGGACAGGGTGAGGGAGTCTAGGGTGGACTGGAGGTCGGGTGGGGCGAGGGTGTCTGGGATGGACTAGCAGGAAGAGTAGAGGCTGAGTGGAGGCAAAGGGAAGGTTTCCGGGGGGCTGAGCAGTCTACAGGCAGAGTGGACTAGAGGCAGAGTGGACTAGAGGCAGAGTGGACTAGAGGAAAGTGAGGGAGTCCGAGGCTTGGGGTCAGGTTAAACTGGAAGCAAGTTGAGGGTGTCAGGAGTCTGGGATTAGTCGTCTGGAGGCAGGGGAAAGCGTCCGGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagattGTAGGCAGGGGAAAGGTGTTCAGGGCTGGGGTGAACTGGAAGGAGACTGTAGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGGCTGGGGTGACCTGGAAGGAGACTGTAGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGGCTGGGGTGAACTGGAAGGAGACTGTAGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGGCTGGGGTGAACTGGAGGGAGACTGTAGGCAGGGGGAAGGTGTTCAGGGCTGGGGTGTCTGGATATCTGGGCTGGGATTGACTGGAGGCAGGGTGGGGGTCAAAGGATCCAGGTAGAGGTTGTCAAGGCTCTCACAAACCCTGCATGGTCAGGGCAGCGGTGACATCGTCAGCCAGAGTGGCTAGCTGTGGAGGCTCCAGCAAGTTGATGCTGTCGGAGGACGACAGGTGGCTGTGGCGGTGGGGGGACAGCGTCCCTGACACGCCCGTTCCCGGTGACTGGGTCATGATGATCTCCGCCCCGTGGTCCACCCGGGCCTTGGCCGTGTCACGGAACAACAGCTTGTGGCTC
>TU318847
ttgtttatatatttattatatattggATGTTGGACAAGCATGATTTGCCTCAAGGATGCTTGATGTATGGTGAATGTTGAGTCTGGCATCCATTCACTTTACTGAGAAAAAAAAGACGTGTTGGCGAGTAGGAACGGGCATTGTATGGGCATGGCCACGTGACTTTCTACCTATGGCAAGAAAAAGCTGCTTCTAAGCACTGAACAGAGACCACCCCACCCTATACCTGGCCCTTACCCAGATTATTTTGTGCAAACAGCTAAAGCCGATTTGGGGTCAGTGCTTCGACACCATCTAACTATTTATATACCTATCTATCTATATGCAgcataaagaaataaaaatacACCAAATACAGGTACTTGGAATGGAAATATCAAGAAAAATGGACCAAAAGTACTTTCTAAATAGTCTGTAGTTCCCTCAGGGTTGTTGTTTCTTCATTTATCTTGATGACATAGGGCAGGGTAGGCAGCTCCATCGGGCGGCGGATATGAGGCTGCTGCAGGATGGCGGTGTCTGAGTGTCTGGGCTGGGGTTGATGAGTAAGCAGGGTTGAGGAAGTCTGAGGGCTGGGACAGGGTGAGGGAGTCTAGGGTGGACTGGAGGTCGGGTGGGGCGAGGGTGTCTGGGATGGACTAGCAGGAAGAGTAGAGGCTGAGTGGAGGCAAAGGGAAGGTTTCCGGGGGGCTGAGCAGTCTACAGGCAGAGTGGACTAGAGGCAGAGTGGACTAGAGGCAGAGTGGACTAGAGGAAAGTGAGGGAGTCCGAGGCTTGGGGTCAGGTTAAACTGGAAGCAAGTTGAGGGTGTCAGGAGTCTGGGATTAGTCGTCTGGAGGCAGGGGAAAGCGTCCGGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGGCTGGGGTGAACTGGAAGGAGACTGTAGGCAGGGGGAAGGTGTTCAGGgctggggtggactggagggagactgtaGGCAGGGGGAAGGTGTTCAGGGCTGGGGTGAACTGGAGGGAGACTGTAGGCAGGGGGAAGGTGTTCAGGGCTGGGGTGTCTGGATATCTGGGCTGGGATTGACTGGAGGCAGGGTGGGGGTCAAAGGATCCAGGTAGAGGTTGTCAAGGCTCTCACAAACCCTGCATGGTCAGGGCAGCGGTGACATCGTCAGCCAGAGTGGCTAGCTGTGGAGGCTCCAGCAAGTTGATGCTGTCGGAGGACGACAGGTGGCTGTGGCGGTGGGGGGACAGCGTCCCTGACACGCCCGTTCCCGGTGACTGGGTCATGATGATCTCCGCCCCGTGGTCCACCCGGGCCTTGGCCGTGTCACGGAACAACAGCTTGTGGCTC

Function

NR:

description
microtubule-associated protein 2-like isoform X10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318846 False 1880 lncRNA 0.57 2 60290682 60292657
TU318847 True 1400 lncRNA 0.54 2 60290682 60292657

Neighbor

gene id symbol gene type direction distance location
myl1 LOC100135947 coding upstream 4602 60277245 ~ 60286080 (+)
LOC110505381 NA coding upstream 20783 60267642 ~ 60269899 (+)
erbb4b LOC106586446 coding upstream 238388 59870559 ~ 60052294 (+)
ikzf2 LOC106586445 coding upstream 708726 59556678 ~ 59581956 (+)
LOC110505376 NA coding upstream 775621 59513445 ~ 59515061 (+)
LOC118964303 NA coding downstream 90017 60382674 ~ 60383352 (+)
tgfbr2l LOC106586454 coding downstream 341882 60634539 ~ 60654313 (+)
LOC110520315 ube2e3 coding downstream 1038702 61331359 ~ 61370875 (+)
LOC110520316 itga4 coding downstream 1183219 61475876 ~ 61505428 (+)
LOC110504376 LOC106586465 coding downstream 1297401 61590058 ~ 61647253 (+)
G281128 NA non-coding upstream 28100 60262368 ~ 60262582 (+)
G281082 NA non-coding upstream 74570 60215884 ~ 60216112 (+)
G281054 NA non-coding upstream 122240 60168239 ~ 60168442 (+)
G281052 NA non-coding upstream 124534 60164479 ~ 60166148 (+)
G281047 NA non-coding upstream 132564 60157806 ~ 60158118 (+)
G281166 NA non-coding downstream 29496 60322153 ~ 60323132 (+)
G281197 NA non-coding downstream 86551 60379208 ~ 60379424 (+)
G281200 NA non-coding downstream 96492 60389149 ~ 60389407 (+)
G281203 NA non-coding downstream 99464 60392121 ~ 60392369 (+)
G281212 NA non-coding downstream 113641 60406298 ~ 60406524 (+)
G281141 NA other upstream 115 60287388 ~ 60303967 (+)
G280315 NA other upstream 236265 60052716 ~ 60054417 (+)
G277973 NA other upstream 2500350 57789734 ~ 57790332 (+)
G277296 NA other upstream 3025790 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 4374549 55915329 ~ 55916133 (+)
G281591 LOC106586456 other downstream 447582 60740239 ~ 60757350 (+)
G281714 NA other downstream 598867 60891524 ~ 60893778 (+)
G281996 NA other downstream 741109 61033766 ~ 61037105 (+)
G282707 il-1rii other downstream 1664731 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 1900947 62193287 ~ 62200069 (+)

Expression


Co-expression Network