G281197


Basic Information

Item Value
gene id G281197
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60379208 ~ 60379424 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU318906
ctctctctctctctctctctaccctatctctactctctctctctatctctctctctctgtctctttctctgtctctctaccctctctctctctctccctctctctatcatctctctctctctctctctctaccctctctctctttctctctctctctaccttctctctaccctctctctactctctatacttctctctttcgctctctctaccctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318906 True 217 lncRNA 0.47 1 60379208 60379424

Neighbor

gene id symbol gene type direction distance location
myl1 LOC100135947 coding upstream 93128 60277245 ~ 60286080 (+)
LOC110505381 NA coding upstream 109309 60267642 ~ 60269899 (+)
erbb4b LOC106586446 coding upstream 326914 59870559 ~ 60052294 (+)
ikzf2 LOC106586445 coding upstream 797252 59556678 ~ 59581956 (+)
LOC110505376 NA coding upstream 864147 59513445 ~ 59515061 (+)
LOC118964303 NA coding downstream 3250 60382674 ~ 60383352 (+)
tgfbr2l LOC106586454 coding downstream 255115 60634539 ~ 60654313 (+)
LOC110520315 ube2e3 coding downstream 951935 61331359 ~ 61370875 (+)
LOC110520316 itga4 coding downstream 1096452 61475876 ~ 61505428 (+)
LOC110504376 LOC106586465 coding downstream 1210634 61590058 ~ 61647253 (+)
G281166 NA non-coding upstream 56076 60322153 ~ 60323132 (+)
G281141 NA non-coding upstream 75241 60287388 ~ 60303967 (+)
G281142 NA non-coding upstream 86551 60290682 ~ 60292657 (+)
G281128 NA non-coding upstream 116626 60262368 ~ 60262582 (+)
G281082 NA non-coding upstream 163096 60215884 ~ 60216112 (+)
G281200 NA non-coding downstream 9725 60389149 ~ 60389407 (+)
G281203 NA non-coding downstream 12697 60392121 ~ 60392369 (+)
G281212 NA non-coding downstream 26874 60406298 ~ 60406524 (+)
G281219 NA non-coding downstream 35537 60414961 ~ 60415185 (+)
G281461 NA non-coding downstream 147106 60526530 ~ 60526829 (+)
G280315 NA other upstream 324791 60052716 ~ 60054417 (+)
G277973 NA other upstream 2588876 57789734 ~ 57790332 (+)
G277296 NA other upstream 3114316 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 4463075 55915329 ~ 55916133 (+)
G281591 LOC106586456 other downstream 360815 60740239 ~ 60757350 (+)
G281714 NA other downstream 512100 60891524 ~ 60893778 (+)
G281996 NA other downstream 654342 61033766 ~ 61037105 (+)
G282707 il-1rii other downstream 1577964 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 1814180 62193287 ~ 62200069 (+)

Expression


Co-expression Network