G281512


Basic Information

Item Value
gene id G281512
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60598810 ~ 60599890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU319260
ACTACACTTTAGCAGCATCCCCTCCAGCTTGTCATCAATGTTCATCTTTACTAGAGACCTAGCTAGCTAGGTGTCTGTGTTGTTAAGAGAGGGCAGAAGTATTAGTTAGGTAAAGACAAACAAAACACCAGTATTTAGCTTTGGTAGCAATAGGCTAACGTTAATAATAAATCACTACAAATGCTTGCTAGCTACAATTTAGTGGGGCCATCATTGAGTAATCTGAGGTTTAGCTGATAACGTAGTTAGCTACCTAAAGATGATCAACCAACCTAATAACGTTAGCCAACACAAACCCGTTTACTCATAATAGCACGTCGACCTGCCCAAAAATTAACGTCAGCAATAAAACTAGGCTTTTTGACCATActatagttagctaacgttaataTTTCATCATCTGTCGCTAGTGGTCAACTGGATAAATTAGCTAGTTAACCAACTAGATTAACGTACTTGAACTACCTAAATATGTAACTAGGTGTTATTATAGGTAACTTTAGTTAGCTAGACAACTTTCGTTAGACAACTTTCGCTAGTTAGCTAAACAAGTAACAACTgcgttagctagctagaaaaCTACCGGTAGTGTGGAcaagcgttagctagctaacgtagttTGCAGTatataattagctagctagctgtgaatgGCAAACgtaagctagttagctagttatgCCTGATCAGAACCAACAACAACCAGAACTAAGATAGCTAGCTACAATACCTCAAATCAAGATTTAGCTTCGCTCAAGACAAGTCAAATCGAGACATAGTTTACGTTAGCTTAAAAGCACAGCAGACCAAACTGTTCACAACTGACATAACGTTAGCCAGCTATTAGCATTAGTTGGCTAGCCTAGCTAACTTACGTAACGTTAGCCTGCTTACCTACTTTATGGTCTAATAAGGTCGTTCAACAGTCATGGTTTATCTGGGAAAAGTGTATCCGCTGTGTGATATACGCCACGACAGAAAATAAACATCACCGCATCTGGCCCAACTGCAGCGCATGGGGACTGTACCGTAGTTGTTCGGCTTTGTGATAGCTCTGCGGCTCACCTGTAGTGAAGCACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319260 True 1081 lncRNA 0.40 1 60598810 60599890

Neighbor

gene id symbol gene type direction distance location
LOC118964303 NA coding upstream 215458 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 312730 60277245 ~ 60286080 (+)
LOC110505381 NA coding upstream 328911 60267642 ~ 60269899 (+)
erbb4b LOC106586446 coding upstream 546516 59870559 ~ 60052294 (+)
ikzf2 LOC106586445 coding upstream 1016854 59556678 ~ 59581956 (+)
tgfbr2l LOC106586454 coding downstream 34649 60634539 ~ 60654313 (+)
LOC110520315 ube2e3 coding downstream 731469 61331359 ~ 61370875 (+)
LOC110520316 itga4 coding downstream 875986 61475876 ~ 61505428 (+)
LOC110504376 LOC106586465 coding downstream 990168 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 1048815 61648705 ~ 61663408 (+)
G281509 NA non-coding upstream 4921 60589657 ~ 60593889 (+)
G281474 NA non-coding upstream 56068 60542421 ~ 60542742 (+)
G281461 NA non-coding upstream 71981 60526530 ~ 60526829 (+)
G281219 NA non-coding upstream 183625 60414961 ~ 60415185 (+)
G281212 NA non-coding upstream 192286 60406298 ~ 60406524 (+)
G281515 NA non-coding downstream 3113 60603003 ~ 60603289 (+)
G281517 NA non-coding downstream 5809 60605699 ~ 60606292 (+)
G281525 NA non-coding downstream 15702 60615592 ~ 60615814 (+)
G281492 snx4 non-coding downstream 19182 60619072 ~ 60621633 (+)
G281538 NA non-coding downstream 34194 60634084 ~ 60634379 (+)
G281141 NA other upstream 308243 60287388 ~ 60303967 (+)
G280315 NA other upstream 544393 60052716 ~ 60054417 (+)
G277973 NA other upstream 2808478 57789734 ~ 57790332 (+)
G277296 NA other upstream 3333918 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 4682677 55915329 ~ 55916133 (+)
G281591 LOC106586456 other downstream 140349 60740239 ~ 60757350 (+)
G281714 NA other downstream 291634 60891524 ~ 60893778 (+)
G281996 NA other downstream 433876 61033766 ~ 61037105 (+)
G282707 il-1rii other downstream 1357498 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 1593714 62193287 ~ 62200069 (+)

Expression


Co-expression Network