G281515


Basic Information

Item Value
gene id G281515
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60603003 ~ 60603289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU319267
gaggcggccaaagaaagaattggttttgggggtgactagagagatatacctgctggagcgtgtgctacaggtgggagatgcaatggtgaccagcaagctgagataaggggggactttacctagcagggtcttgtagatgacatggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcgtacaggtcgcaatggtgggtagtatatgggccatgcattatcatgctgaaacatgaggtgatggcggcggatgaatggcatgacaatgagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319267 True 287 lncRNA 0.53 1 60603003 60603289

Neighbor

gene id symbol gene type direction distance location
LOC118964303 NA coding upstream 219651 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 316923 60277245 ~ 60286080 (+)
LOC110505381 NA coding upstream 333104 60267642 ~ 60269899 (+)
erbb4b LOC106586446 coding upstream 550709 59870559 ~ 60052294 (+)
ikzf2 LOC106586445 coding upstream 1021047 59556678 ~ 59581956 (+)
tgfbr2l LOC106586454 coding downstream 31250 60634539 ~ 60654313 (+)
LOC110520315 ube2e3 coding downstream 728070 61331359 ~ 61370875 (+)
LOC110520316 itga4 coding downstream 872587 61475876 ~ 61505428 (+)
LOC110504376 LOC106586465 coding downstream 986769 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 1045416 61648705 ~ 61663408 (+)
G281512 NA non-coding upstream 3113 60598810 ~ 60599890 (+)
G281509 NA non-coding upstream 9114 60589657 ~ 60593889 (+)
G281474 NA non-coding upstream 60261 60542421 ~ 60542742 (+)
G281461 NA non-coding upstream 76174 60526530 ~ 60526829 (+)
G281219 NA non-coding upstream 187818 60414961 ~ 60415185 (+)
G281517 NA non-coding downstream 2410 60605699 ~ 60606292 (+)
G281525 NA non-coding downstream 12303 60615592 ~ 60615814 (+)
G281492 snx4 non-coding downstream 15783 60619072 ~ 60621633 (+)
G281538 NA non-coding downstream 30795 60634084 ~ 60634379 (+)
G281579 LOC106586456 non-coding downstream 120293 60723582 ~ 60727146 (+)
G281141 NA other upstream 312436 60287388 ~ 60303967 (+)
G280315 NA other upstream 548586 60052716 ~ 60054417 (+)
G277973 NA other upstream 2812671 57789734 ~ 57790332 (+)
G277296 NA other upstream 3338111 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 4686870 55915329 ~ 55916133 (+)
G281591 LOC106586456 other downstream 136950 60740239 ~ 60757350 (+)
G281714 NA other downstream 288235 60891524 ~ 60893778 (+)
G281996 NA other downstream 430477 61033766 ~ 61037105 (+)
G282707 il-1rii other downstream 1354099 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 1590315 62193287 ~ 62200069 (+)

Expression


Co-expression Network