G281680


Basic Information

Item Value
gene id G281680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60849182 ~ 60923455 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU319459
ACTCTGTCATACTTTTTTGAGATCAGTCAAATTGGTAAATCTTTTATAAGCCCAAATATACAGTATTCATTAAGAATACAATTGCCTCAAACATACAGTGAAACATATATTTACAGCACATataatgtatataatgaacatatcctttttaaaaatgtaattttaCAGCCAACCCCAAGGCCTTATTTTGAATGGATGTACTTTGCCACTGTAGACATAATGAAAAAATAAACTCTACAGTAGTACATTCAATATTAGATTAAAATTGTGTTAGATATTGCATTTTTTTgtgtacaatatatatatttttaaaatcatTAACCAAAAGAAATAAAATATTATCAGAAACTCATTCACAAAGAAAATGTTTAAATTCTGCACTTATTGATGATGCTGTACTTATTGTACAGCATCATGTTAAGATGGAACTATCATGGTTGCATTGATAATTGATAATTTTACATGCACTTCTTAAAGCTGGAACCCTTAATGGTGAAACTGCCACATCCGTttgggatattacaacaacaacgtTACTGAAAACAACGCCCACTGTTTTTCCTGACATCATTGCACGCGCGATAGAACAGCAGAATATGAACCGTAATTATTATTTTTACCACACTGCTTTACGCACCTCACCTCAATTTCGGCAACAAAATAAAAACTATAACAAAGGTGCTGGGGCGGACAGTCATGCTGTTTACCCTAATGTAAATTCCAACTTCAACACTACACACTGGGAATTGGATCCCCAGttctccattgagcatgctttttcGTTCAGGAGTACTCTTGATCTGGGTCCGAGAAATCCCCAGTGATCAATTAGATAAGCCCCAGAGTATTTTTGTATTTGTTATATTATGTATGACTATATATTCAATTATATGATTAATTTGAAATATTAAAACATTGGACATTTTGGGCCTAACACGAATGTCTTGATAACAATGTTTTGCTTACACATGGGTGGTAAGTATTCATACACGTTGTCATGTTAAATAAAACTATAGGCATTAACTTTTGTTTTACTATTTTGAAAAGCAAACATTCAACATTCAAACATACCCAACATGATTATATAACATTTATAATTACTCTTATGTGTGACGTAATTACACACTATACACAATAAATAAGATCTACACCTAATTTCAGAAAACCTTTTGCGTGTATCTCAAAATAATGAACAAAAGCTACTTTTCGAACATACAATTGCTTAAATGAGTTCAACATCCACATGAAAACAAATTACATGAAGAGATTAGAACACTTTCAACAAAGCAGTTGTTTCAGTATATCCAGATTTATTTTGGATGAGACACTTGTACTCTCCAGCATCATTTTTAGTGACATTTGTTATGATCAAATTAAAATGTCCAGATGCTTTCTCTTGGATCATGTACCTAGTTTCTTTCACAGGATCCCCGTCTTTGTACCATTCAGCAGTGGGATGAGGTTTACCATTAACTAAACACTGGAGGACCACTGGAGTTCCTACTGCTGCAGTGACGTTTGTCAAAGGAACAATACATTTTGGTGGAGTTTCAGTCATTTGAAACTGGAAACTACACAATTCCGATGACTTTCCTTTGAATTCTATTTTATCATCTTTGGCGGGCTCTGCGAAAACATCAAAATTTATACTGACATATTTCTCTCCCTGCTCGCTCATCTCATTGTCTGTCATGGCTACGAGTCTAACAGCCTTTTGTGATTCATCAGCTTCCTGCTCAAATTCAAATTCCAGCTCTATTTCTGATGCCTGCTCACCGTCAAACTCATTCCCAACAACCAAGTCAAACTTTTGAGGCTGAACTTTAGCACTACCAAGAGACACAGCTGTCAATTCTCTTCCTCTTGTTTTCCCTATAAAGCTTTTAGGATTCAACACAAGAAGAGATGCCCTGCAAAGAGTTTCCCCAACCACATTGATGGCCCTGCAGGTGTATATTCCACTATCATGAGCGTTGGCTTTCCTGATCTTTAGGAAATGATTGTCTCCATCAGATGAGTACAAGTATTTCTTGTTATCGTGAGGGATCTTTTTGTTACCTTTAAACCATGATACTATGGGAGAGGGAATTCCCATCAGAGAACACTCAAACATTACAGTTGTATTTTCGGGGGTTTCCATATCACAAATTGGGTTGATGAAGCGTGGTGGCATTTCTGTAACCTCAAAAGCTATTTTCAAATCATCCCTTTCTTGCGTTACAAAGTCAACTCCACTCTCCTCGTACATACTCGGGAGAACATCGAGTGATATTATCATACTTTTATTGTCAGCGGTGTATTCAGGGACGGTAATTATCTTCACCTGTCTCTCAAACTCTTTAACCTCATTTTCATCCAGCTCCACCTCTAATAGAATCTCCTGAGGTGAGCAAGACCTTGATGAGTCATCATCTTCCTCAACATCAAACTCCATCACATGCTGGTGGGTGACTGCTGGTGGTGGGGGCATATATCTGGCCTCGTTTGATATAACTACAACTAGTGCAACGCTTTTTGCCTCTCCTACATAGTTAACAGCTTCGCAAATATATTCACCTTGATCAGCTTTCGTAATGTTTTGAATAAAAAGTGTGATATTGTCACCATCTCTATCCATTGTAATCCTTTCTTCTGCAACAAGCTGCGTTTTGTTTCTAAACCACTTCACTTCAGGTGAAGGCAACCCAAATACCTCAGCGTAAAACGATAACGAATCTTGTTCAAAAACTCTCCTTTTGGTGAGAGGTTTGAGGAAAGCCGGAGGGATTCCCTGgactttttcctgtagtcctccAAGGCCAAGCGCACGCTCTGAGAGGAAGATTCCTTCCTCTAAGCTAAATGCAGGTGGAGTTGTCTCAATGCCCTCATCATCAGGTGACCTCAAGAACTTAGCAggagaaaataacctctcactgaAGTCAGTAGATGTTCTTTTATGTTCAAGAGGAGAGAAGGCATACTCATTGGGGGTCATATAACCTGCTGGAGTTTCAGTTTCAGGAGTGTGGAAAGATTCGGGAGATTTCGGGAGCTGCGAAATTTCAGTTGAAGAAGCTGGCGTATAGAACCGCTCGATTTCTGTTAATTCCTCACTAAATGTGCTACCACACTCAATGGACATCTCCGACTCTGGTGATAGGGGTCTGCCCCACTCAGTTGGTGGGTTGTAGTAGTCATAAACAGTACTGAAGGTCACTGCCTCCTCTTCAAGTGAGGTCAAACCTGTTGCACCTTGACTGTCAGCCGTACTTAGATAAGCACTGTCTGGTTTAGCCTCTGCTTGCTGTTGTGAACCTTGTGCAGCAAGATCATCTGTAAAACCATCTTCTTTGAACTTAATACTCACTGATTTTGAAACCTCTGAAGGCTCACCACTCTCAGCATCAGCATGTTCCTCGTTTTCCTCTGCAGTTTTTTCACTAACAATTTCACTACGTGCCCCACTAACACTGACAAATGCGCTACCCTTTGAGCGTTCAAAGATAGACATATTTTCATTCATATGAGTCATGTCCTCGCGATCAGAAGACTCAGTGTCCAATCTCTGAACTTCTGGAGCAGCAAATGAGCCAGAGAATCTTTTTGGCTTTACAACCTCATTACCGACTGACGCTGAAACATCATCTGGGATCTCCGACACTGGGACTTTCTCACAAGGAAGGAAGCTACTGCCAGTACTAACAAATGCACTTTCACTGTCCTCTTTCATACTTTCATCTATCACACCAGGTCCTATAATTTCTGGAGAAGGGCTAGTCCTTACTGCCTTAACTGCCTCAGGTCTGACCAGTTTTGGTGACTCCTGCACCTCTGCTACACTTGAGAGGGGAACAAAGTGTTTTAGGTCACCATGGGTGTCAATTATGCCAGCTTCCTCAACAGTTTCTCCTGAAATCATACAGATTTCCTTGTCTTCCTCCTGAGTAGTAGACATGGTCTGACCATGCTCAGGGGCACTTTTTGGAGAGACTGTCTTCGCTTTGGTCGAAATTTGTGTATTACTACCTTCTAGTAAGACAACCTCTGGTCCACTTTTGGGGGAAATTGACCTTTCTCTCGAAATGTGTGTATAACTACCTTCTACTAATATAGTGTCTTGTTTGGCCTGCAGTGGAGTTCCTTCCACAACATTAGTTACCAATGACATATCATCCTGTTCAGGATGGATTGATACTTCTGGGATATCCTCAGGGAAATATGACTCTGTGGACTTTTTCACTTCATGAACAGTGGTATCTGACAATGCAGGTGCCTCTGACAACGCAGGTGTCTCAAAGGCCTGCTTAATATGTGACGTTTCGACTACTGCAGCAGATGATTGCCGACCACACCCAGTAACAGTAGGTGCTTCTTTTGAAACACTTTGCTTTGGTTTAGTTACTTTTGGAATAGTCTTTTTAAGGCTGTGAGAACCTAAAGTTCTGTCCAAAGTCAGCATCAATGCCTGGTCAGTAATATCACCAGGATCACTCAGAGGGGACTGCCTCAAATCTTCTGAATTTCCAGATAGTATATATTGTTCCCATTCACCAGCCATGGCTGCTTCTACCTCAGAAGATCCAGCAATAGCAACAGCTGGTTGGAAGTACACATCAGAACTGCTTTCAACCTTACTGGTTTGGCCTTCTGAAGAGCTTATGTTCTCAGATTGACTGACTACCTTAGCGGCATCACTCGGATCATAGGAGAATGTGAATTTGTGTTTCATAGGATGGGAACTGCCATCATCCTCAGACATATCTGTGTCTTTTTCAATCATTTCGAATGGGACTGGTGTTGGAGCAGTGATCCTGATCTCGACATTAGAAGTAGAATATTGTGAGTCTGAAGCACGAGGTCTGTACAAGACAGCCCGAGGCACCTGTAGAAAGGATTTCTCATCCGTTTCAACGTCTATGTATGATTCAAGTTCCTCGTCCATCATTTGGTCAACATCTTCTTCACTCATTTCATAATCTGTTGTCACTTTCACTTTACGCGAGGCTACCGGCGATGCTGATTTTGTTAATTGCTCACTCTCAGTAACTTCGAGTGTGGCAGAGGAGGTTGCCTTTCCAAATGTATTAGTGATAACACAACTAAATGTCCCCTCATGGTATATAGTCGGATAGTAGATGGTTAATGTGGTTTCATTCAATTTGATGAGAACATCAAAGTCTGGGTTTTGACTGATTGGATGGTCATCTTTGAGCCAAGTGACAGTTGGTTGAGGGTCTCCCCGGAAACGACATTTAAAGTCTGTCATCTCTCCCCTCTTTACTTTCATGGATGAGATTTCTCTCACAAAGATAGGTAGTGATGTTTTCGGTGAAGTCTTAtcaaattcctttgtcctctgATGCATGTCCATTTGGCGAAGGTCATCTTTTGATAGCATTTCTCTGTGTTCTTCTTTCCTCTCTGTGGTCCTCATAGACACTTTTTCTTTTTCATCAGGTCTTAAGTCGGATTCCCAATTGGAAGGCCCTTCTGCACCAACTTCGGCTTGAGAACCATGCTGACCAATGTGATGTTCTCTCAAAGGTGAACGGCCTCTTCTAGGTGAGGCTTCTCTACCAGGTGAGGCTTCTTTCACAGGTGATCGAACTCTGCCAAGTGAGCGTTCTCTGCCAGGGGAGGGCTCTCTACCAGGTGAGGGTTCTCTCCCTGGTGAGGACCCTCTAACTGGTGAGGACCCTCTCACCGGTGAGTGAAACCCAAGTGACATTTGATGAAACTTCTCTATATGATGAGAAACAGGTTCATAAGAAGGACCGTCATTGGCATCATCTCCACTGGCATAAGTTCTCTGACGATGGTGTTGTGAAAGTTCAGCCATAGCCCAATCCTCTTGAGAGACAAGCTCACCAATTCGATGTTGTCTCATAGGTGAGGATTCTTTCACAGGAGAGCGCTCTTTAATTGAAGAGCGTTCTTTCACAGGCAAGCGTTCTCTCACAGGTGAGGACCCAAATGACATTGTATGAGACTTCTCATTCTGATAAGAGGCTGGTTCAAAAAAGGAACGTTCATGCTGACCAATGTGATGTTGTCTCATAGGGGAGGGTTCTCTCACAGGTGAGAGTTCTTTCACAGGTTCAATAGAGTGACCTGCATCGGGTCCACTAGCATCGGTTTTCTTTGGGTGTTGTGAATGTTCAGCCAAAGCCCAGTTAGACTCTAATTCAACAGCTTCTTCTTGTTCGGTGAGAACGTCTTCTTGCCATTTTAAGATGCGCTGAGCCAAAGCTTCCTCTTCGCTCACAAAATACTCACTTTCGGTCTGCAACCTTGTTTCATCAATAACAGTTTGTGGAGGAGGGGGCCACTGGAAACTTTCATCTTTGAAATTATGGATATCCTTACTCTGGGACTTTTCCTTTGCTGTCCTTTCTGGCGAAGATCTTCTTTCATATCTGTAGTCATGAGGGGCATGCTCACTCAGGAACATTTCCTTTGTCATCTTTTCTGGAGTTGGCCTTTTTGGGTCTTCATGGGCTGTATCATCACGGAGAAGCATTTCCTTTGTTGTATTTTCTGCAGAAGACTTTATACTTACATCTCTGTACTCATGAGGTGAGGTGCTGTCATATCTATATTCAGGAGCAATATCCTTCTCAGTAAGGACATGTTTGTTTACTGTCTTTTCTTGTGTGGACCTTCTCTCATCTCTGAAATCATGAGGGACATCCTCAGTCAAGAATTTTTCATAGTCTGTCTTTTCCGGGGAAGGCTTTCTTCTTCTCGCTGAATCTGCCTCCGAGTGAGTGGTTGATCCAAGAGCAGTGCCCTCAGCAGCCATTTTTGATTCAGACCTTTTTCTAGCAACATAGTGTGAGTAATCCGCACCAACCCAATCAGAATCCAAGTCAACAGCTTTCTCCTGCTCAGTCAAAACGTCTTGCTGCCATTTCATGATTCGATGTGCCAGAGCCTCTTCCTCACTCCCAAACTTTTCACTTTCGCTCTTTAATTCATAAATATTTTCCCGGGATAAGTGGAGCTCTTCACAGGACAAGTCAAGTCCTTCCTGGGATACATGGTGCTCTTCTCGTGTTTTCTTTTCACTGGCACGCCTCTCTCTTGGGGAATGGGGCAAATTCTGTTCACTGTCACTCTTCAACCCATAAATATTCTCCTGGGATAAATGGTGCTCTTCTCCTTTTTTGTTCACACTGGTACGTCTCTCTCTTGGGGAACGGGGCAATTTCTGTTCACTTTCACTCTTCAATCCAGAAATATTTTCCTGGGATAAGCGGAGCTCTTCCCcttttttgtttaatttatgtttgtaagtttgtttgaaatgtatgtattgagagacgcaatgatggggatggggtgagagaagcaccgagcgggaagaggaaaatggtgtacgtatgtatgggtgtgtgtgatatgtatgtatgtatgtgtgtctatgtatgtgtgtatgcatatatatgtgtatatgcatgtgtgtatgtgtatatatatatgtttatatatatatgcgTAGGTCTGTGTAAGTGAGTGCTGTTttcttttgtgttttttttggtgtgctttgtctctgttgttgtatctcttaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU319459 True 7557 lncRNA 0.41 2 60849182 60923455

Neighbor

gene id symbol gene type direction distance location
tgfbr2l LOC106586454 coding upstream 194869 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 465830 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 563102 60277245 ~ 60286080 (+)
LOC110505381 NA coding upstream 579283 60267642 ~ 60269899 (+)
erbb4b LOC106586446 coding upstream 796888 59870559 ~ 60052294 (+)
LOC110520315 ube2e3 coding downstream 407904 61331359 ~ 61370875 (+)
LOC110520316 itga4 coding downstream 552421 61475876 ~ 61505428 (+)
LOC110504376 LOC106586465 coding downstream 666603 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 725250 61648705 ~ 61663408 (+)
LOC110520324 LOC106586470 coding downstream 849978 61773433 ~ 61832413 (+)
G281579 LOC106586456 non-coding upstream 122036 60723582 ~ 60727146 (+)
G281538 NA non-coding upstream 214803 60634084 ~ 60634379 (+)
G281492 snx4 non-coding upstream 227549 60619072 ~ 60621633 (+)
G281525 NA non-coding upstream 233368 60615592 ~ 60615814 (+)
G281517 NA non-coding upstream 242890 60605699 ~ 60606292 (+)
G281754 NA non-coding downstream 29685 60953140 ~ 60955335 (+)
G281957 NA non-coding downstream 42873 60966328 ~ 60966638 (+)
G281958 LOC105896813 non-coding downstream 44114 60967569 ~ 61023059 (+)
G281970 NA non-coding downstream 63083 60986538 ~ 60987139 (+)
G281976 NA non-coding downstream 68451 60991906 ~ 61027640 (+)
G281591 LOC106586456 other upstream 91832 60740239 ~ 60757350 (+)
G281141 NA other upstream 558615 60287388 ~ 60303967 (+)
G280315 NA other upstream 794765 60052716 ~ 60054417 (+)
G277973 NA other upstream 3058850 57789734 ~ 57790332 (+)
G277296 NA other upstream 3584290 57264567 ~ 57264892 (+)
G281996 NA other downstream 110311 61033766 ~ 61037105 (+)
G282707 il-1rii other downstream 1033933 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 1270149 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 1444159 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1782876 62705451 ~ 62712740 (+)

Expression


Co-expression Network