G281996


Basic Information

Item Value
gene id G281996
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61033766 ~ 61037105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU319833
ACAAACAAAATgtttaacaaacaaacaaatgataATACAACCACATATATCAAATAAAACTTAATTTATGCCTCAAACACATCATAGAAAATCATCTGAAAATAAATACTGTACATGTTtacagagagcagagggcagggagcagggagcagagggcagggagcagagagcagagggcaggGAGCAGAGGGCAAGGAGCAGAGGGCAGGGAGCGGGGAGCAGAGGGCAAGGAGCAGAGGGCAGGGAGCAGGTAGCAGAGGGCAGGGAGCAGAGGGCAGGGAGCAGggagcagaggGCAAGGAGCAGGGAGCAGAGGGCAGGGAGCAGAGGGCATTGAGCAGAGGGCAGGGAGCAGAGGGCAGGGAGCAGAGGGCAGGGAGCAGAGGGCAGGGAGCAGAGGGCAGGGAGCAGAAGACAATATGAGGATCTTATATCTCTTTCATTTCAACATGCCTTTTATTGACAATATCTTCGTCAGGTCTCCTTTATAAACTAAATTCAGTTCATAATTAAATAATTTAAAGTTATTTTTCATTTGTGTAAAATACAATTTCAATATGGAAGCAAATCATCCAAATATATTACTTTATTTTAAAAGGTAAATGTCAATGTACAGTCTCCTATATTGGTTCAGAAGACATCCCACCATCTTGAAAACAACTGTCATTCTTTCATGTTCAAGTGGATTGTTGTTTTCTTTTACTTAAAAAATACCaatacctctgtctgtctctctgtcgctctccatAACTAGTGTTTTAACGTGGAAAGGGAAACAATACATTATACACTACAGAGAATAAACTGTACCAATTCAATGCTCTGTACATTATTGCATCAGAAAGCCACAACATATTGCAGCATCGTTTAAAACTAGGGATATTACATAGATATAAATGAAAGGCCCATGGTAACCCTGCCAAACAACAGGGTGATGCAAACAGGTTAACATCAGTTgaatttcaattcagtcaattcagtcaGCAAACTGAAATGAACTGAAGTTTAATTCCTGAATTCACGGTTTTGAAATGGAACAGACCTCATCCCTGGATACAAATGATGAACACTAATAGATTCTACCCTTCCTCTTAGAAAATAGTGACCGATGATTACATAATATACTGCAGAAACAAAGTACTGTAAGGGTCTAATCCTGACTTGAGCTCTGCACACTTAACTAACATGTTCTTGAAGAGACTTGAAGTCTCCTGTTGACATCAATGCATCTCAAGTTAAGATTCGGCCCTTATTAAGAAACCAAGAGAATGGTTTCTCTCTCTGAAGTGGGGACAATGAGAACACTGTTACTAAATAATTTGTTACTATGGCTATCTACTGTAAGTTGCTGCATCAGAAGTAAAGTAAACCAATAATACAGACTGTTTGATGATAAGAAGAGTTGTGGTGTAGAGATTCAGCTTATTGACTTACATAATACAGACAGAATAGAGACCAAAACTGCATTACTGTGTTACAGTCACTGACATCAAGCAACAACTGAAACATTTGACTGATTTCACACTACTGGGCCAGACCAAGCAGATCCAAGCTATACTGCTCGGGTCTGGTTATGCATCTACCGTAGTTGCTGGAACcgtgctggaaaggacaatgtgagAAGAAAATATTCAAGCCAGCTCAGTATGGTTCAGGTCGGCTCTATAGTGTGGATCAGGTATGACTGTCCTTCTGTCTGGGGGCTGTTATGATAAACACTGTCAAACACACGCAGCTAGAACTGTCCATTAATTTAATCAAATAGGAAGACTATGGGTATTCAAGTCATTCAGGAAGCAGTTTGATTCTCTTTATTATACCACAAGAATCCAATACTTAGACCCTCAGTGGTCTTAGCGGGCCCACTGAACCTCTGTGCTTCATGCCTCAGGGCAATGCACGCAGCCAGAGAAAGGTAAACAAGTTCAATCAAATAAATACACTGTTGTTTGTTGAAGCTTCGCAGTGCAGTAGTCCTCTCAGTTCAGTGCATTGGGTGGGTATTGTATGTAATAGGACATCATCCAGTATGCAGTGCACTCACTGCTCCACAAGGTCAGAGGTCCCCTGGTTCTCTGCTCATGACAGTTTCCCTCCGTGTTGCCTCTGGTGCCCTCTCTACCGATacactgggtcgtgttcattagggtacACCGTAAGCAAAATATTTTCGCAATGGGAgacaaaaacaagcatttcttattggacgaGCTCAGATAGTACCTCACCGTTTTGCTCAGTTTCCTCCCCATTGCACTCAGGCTCTGTCCATTTTCTTCCATTCCCTGCCTACTGAACACGACCCCTGTGTCAAAACCCAGGAATCAATATGGGGTGAAGAGGATAGAGCCGGTGGTGGGCCGGACTGGCCCTGGAGCAGCCCGGAGGAAGGAGGGCATGCAGCCTGGCAGGCCAGCAGTCTGAAAGATGGAGGCGTTGGGCCGCGGAtgcagggagatggaggggagggtggTGGGGCAGAAGGGGTTAGAGAGAAACGTAGCAGGGGAGATAGGCTTCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319833 True 2522 TUCP 0.44 2 61033766 61037105

Neighbor

gene id symbol gene type direction distance location
tgfbr2l LOC106586454 coding upstream 379453 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 650414 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 747686 60277245 ~ 60286080 (+)
LOC110505381 NA coding upstream 763867 60267642 ~ 60269899 (+)
erbb4b LOC106586446 coding upstream 981472 59870559 ~ 60052294 (+)
LOC110520315 ube2e3 coding downstream 294254 61331359 ~ 61370875 (+)
LOC110520316 itga4 coding downstream 438771 61475876 ~ 61505428 (+)
LOC110504376 LOC106586465 coding downstream 552953 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 611600 61648705 ~ 61663408 (+)
LOC110520324 LOC106586470 coding downstream 736328 61773433 ~ 61832413 (+)
G281976 NA non-coding upstream 6126 60991906 ~ 61027640 (+)
G281958 LOC105896813 non-coding upstream 10707 60967569 ~ 61023059 (+)
G281970 NA non-coding upstream 46627 60986538 ~ 60987139 (+)
G281957 NA non-coding upstream 67128 60966328 ~ 60966638 (+)
G281754 NA non-coding upstream 78431 60953140 ~ 60955335 (+)
G282245 LOC106582271 non-coding downstream 169535 61206640 ~ 61223982 (+)
G282351 NA non-coding downstream 336623 61373728 ~ 61374361 (+)
G282350 NA non-coding downstream 337497 61374602 ~ 61374869 (+)
G282357 NA non-coding downstream 344119 61381224 ~ 61381473 (+)
G282373 NA non-coding downstream 360680 61397785 ~ 61398000 (+)
G281714 NA other upstream 139988 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 276416 60740239 ~ 60757350 (+)
G281141 NA other upstream 743199 60287388 ~ 60303967 (+)
G280315 NA other upstream 979349 60052716 ~ 60054417 (+)
G277973 NA other upstream 3243434 57789734 ~ 57790332 (+)
G282707 il-1rii other downstream 920283 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 1156499 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 1330509 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1669226 62705451 ~ 62712740 (+)
G284313 NA other downstream 1979221 63016326 ~ 63022591 (+)

Expression


Co-expression Network