G282179



Basic Information


Item Value
gene id G282179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61109128 ~ 61110355 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU320047
GTTTGTGATGAGAGAGAAATCGACACCATTGTTGTTGGCGGAGTAACTACAGGTCAACTCTTCCACGAATCCTTGGCCAGCGCAGGATAGTGAGTGTCTGAAAGGGAAGACATCCAGAGTGATCAGTCAGGGAATTTGATCAATCAAGCCTACACTGCCTCCTGACAAACCCATGAATCACTGGGGGCTGATTCCTTCTGCCTGAATCCTGAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU320047 True 214 lncRNA 0.48 2 61109128 61110355

Neighbor


gene id symbol gene type direction distance location
LOC110520311 LOC106586460 coding downstream 95951 60974920 ~ 61013177 (-)
LOC110520310 LOC106586459 coding downstream 151265 60952856 ~ 60957863 (-)
LOC110520309 LOC106586458 coding downstream 167935 60891843 ~ 60941193 (-)
LOC110520307 LOC106586456 coding downstream 220866 60709954 ~ 60888262 (-)
LOC118944682 NA coding downstream 419664 60686454 ~ 60689464 (-)
LOC110520314 LOC106586461 coding upstream 92548 61202903 ~ 61254638 (-)
LOC118964366 NA coding upstream 160161 61270516 ~ 61270572 (-)
LOC110520318 NA coding upstream 396619 61506974 ~ 61548252 (-)
LOC110520317 ndf1 coding upstream 468224 61578579 ~ 61583060 (-)
LOC110520320 LOC106586468 coding upstream 553350 61663705 ~ 61728601 (-)
G282125 NA non-coding downstream 78367 61030386 ~ 61030761 (-)
LOC110520306 LOC106586457 non-coding downstream 448633 60659246 ~ 60682924 (-)
G281872 NA non-coding downstream 492697 60616186 ~ 60616431 (-)
G281832 NA non-coding downstream 568783 60540132 ~ 60540345 (-)
G282206 NA non-coding upstream 32991 61143346 ~ 61145221 (-)
G282977 NA non-coding upstream 83292 61193647 ~ 61211320 (-)
G282986 ube2e3 non-coding upstream 222366 61332721 ~ 61340510 (-)
G283082 NA non-coding upstream 261681 61372036 ~ 61372475 (-)
G283088 NA non-coding upstream 270387 61380742 ~ 61380944 (-)
G277749 LOC106586429 other downstream 3519945 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 3705553 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 3811366 57270782 ~ 57297762 (-)
G275250 NA other downstream 5697641 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 5989916 55068639 ~ 55122013 (-)
G284018 NA other upstream 1604220 62714575 ~ 62715177 (-)
G286522 NA other upstream 3859194 64969549 ~ 64970755 (-)
G286580 marco other upstream 3903904 65014259 ~ 65029736 (-)
G286638 NA other upstream 3944345 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 4124825 65235180 ~ 65235908 (-)

Expression



Co-expression Network