G282374


Basic Information

Item Value
gene id G282374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61398045 ~ 61398461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320260
cggaggacctgagccctaggaccatgcctcaggactacctggcatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgttctgcctgcggctatggaatcctgacctgttcaccggacgtgctacctgtcccagacctattatttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaaccctcatagcctggttcctctctaggtttcttcctaggttttggcctttttagggagtttttcctagccaacgtgcttcaacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacaaagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320260 True 417 lncRNA 0.51 1 61398045 61398461

Neighbor

gene id symbol gene type direction distance location
LOC110520315 ube2e3 coding upstream 27170 61331359 ~ 61370875 (+)
tgfbr2l LOC106586454 coding upstream 743732 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 1014693 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 1111965 60277245 ~ 60286080 (+)
LOC110505381 NA coding upstream 1128146 60267642 ~ 60269899 (+)
LOC110520316 itga4 coding downstream 77415 61475876 ~ 61505428 (+)
LOC110504376 LOC106586465 coding downstream 191597 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 250244 61648705 ~ 61663408 (+)
LOC110520324 LOC106586470 coding downstream 374972 61773433 ~ 61832413 (+)
LOC110520325 LOC106586471 coding downstream 438204 61836665 ~ 61841206 (+)
G282373 NA non-coding upstream 45 61397785 ~ 61398000 (+)
G282357 NA non-coding upstream 16572 61381224 ~ 61381473 (+)
G282350 NA non-coding upstream 23176 61374602 ~ 61374869 (+)
G282351 NA non-coding upstream 23684 61373728 ~ 61374361 (+)
G282245 LOC106582271 non-coding upstream 174063 61206640 ~ 61223982 (+)
G282387 NA non-coding downstream 11421 61409882 ~ 61410094 (+)
G282399 NA non-coding downstream 29822 61428283 ~ 61428579 (+)
G282417 NA non-coding downstream 108456 61506917 ~ 61511531 (+)
G282458 NA non-coding downstream 129553 61528014 ~ 61528255 (+)
G282460 LOC106586556 non-coding downstream 136290 61534751 ~ 61535027 (+)
G281996 NA other upstream 360940 61033766 ~ 61037105 (+)
G281714 NA other upstream 504267 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 640695 60740239 ~ 60757350 (+)
G281141 NA other upstream 1107478 60287388 ~ 60303967 (+)
G280315 NA other upstream 1343628 60052716 ~ 60054417 (+)
G282707 il-1rii other downstream 558927 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 795143 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 969153 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1307870 62705451 ~ 62712740 (+)
G284313 NA other downstream 1617865 63016326 ~ 63022591 (+)

Expression


Co-expression Network