G283166



Basic Information


Item Value
gene id G283166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61485857 ~ 61525273 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU321151
ATAAGAGACAGTACCAGGACAGTACACAATACTTTACAATGTACCAGTTCTAAGAGATGACTAGCTAAGAGATGACTAActgtctacatctctctctctctgtcagtctaccATATATCCTGTTTAGTTCACAGTGTATCACTAGTGGAAGATGCGAAGATGAGAAGCAGAGAGTAAGCAGACAACCATCAGTAGTGACCCTAATTTAAACCCCAGGATATTCCCACTGCCCAATTTGGTTTTCCCTGGGTagcagccaacacacacacacacacacactcacccacgtgCACACATATTTTCCCGTCCCCTGTCCTCAGTTCTCAGTTCTGTTCCCACCACTGCCATGTTTTGACGATCTTACTAATTTAAGGCACAGCATGTGTGACATAATAACAGGACATTTCCGTGTTTTCTGTTCTAGTCAGCAGTAGAGAAACCGAGACAGACTCAAACATTGTACTGGAGGGAAAGGTTGACAGTCAAGGTTGACAGTCAAGAAAGGGATAGTTACCTTGGTAACCGTTTTCATCAACATCGATGCCTCCTGACACAGACTGGCCGAACATCTTTAACTCATTACCCAGAACAGAGCCAGTGATCCTCTGATGATGGAACAAGAACAGCTGGATTATTGTTACAGTTTAACCCTCTGTACTTCACACACTTCATACACTTCATTTTGTCTCCCAAACCAAGAGAGCTGTCTATGACTACCAGATGTAAGCTGTACAGTacatatttcagctttttttctaGTACGGAGCTTTGAGATTCAAGTAAGGTAATTGATCTGTATTTGgatatacagtaactatatttTCTCCAAGAGGTTGTATTCCACATTGAGATACATTTATTTACATATACATTGCTTTATCTCTATGGTATTCCATAACTAAAAGCTCATTTAAATGTAACTGCTTCATGTAAACT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU321151 True 936 lncRNA 0.41 2 61485857 61525273

Neighbor


gene id symbol gene type direction distance location
LOC118964366 NA coding downstream 215285 61270516 ~ 61270572 (-)
LOC110520314 LOC106586461 coding downstream 231219 61202903 ~ 61254638 (-)
LOC110520312 LOC106586462 coding downstream 293984 61034879 ~ 61191873 (-)
LOC110520311 LOC106586460 coding downstream 472680 60974920 ~ 61013177 (-)
LOC110520310 LOC106586459 coding downstream 527994 60952856 ~ 60957863 (-)
LOC110520317 ndf1 coding upstream 53306 61578579 ~ 61583060 (-)
LOC110520320 LOC106586468 coding upstream 138432 61663705 ~ 61728601 (-)
LOC110520322 LOC106586411 coding upstream 243230 61768503 ~ 61772972 (-)
il-1r1 il-1r1 coding upstream 364836 61890109 ~ 61916561 (-)
zmp:0000000936 LOC106586476 coding upstream 394621 61919894 ~ 61956548 (-)
G283108 NA non-coding downstream 84451 61401186 ~ 61401406 (-)
G283105 NA non-coding downstream 87510 61398058 ~ 61398347 (-)
G283100 NA non-coding downstream 91981 61393662 ~ 61393876 (-)
G283088 NA non-coding downstream 104913 61380742 ~ 61380944 (-)
G283082 NA non-coding downstream 113382 61372036 ~ 61372475 (-)
G283184 NA non-coding upstream 9167 61534440 ~ 61534642 (-)
G283195 NA non-coding upstream 26875 61552148 ~ 61554728 (-)
G283197 NA non-coding upstream 36890 61562163 ~ 61562391 (-)
G283198 NA non-coding upstream 42702 61567975 ~ 61568475 (-)
G283224 NA non-coding upstream 77484 61602757 ~ 61603197 (-)
G277749 LOC106586429 other downstream 3896674 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 4082282 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 4188095 57270782 ~ 57297762 (-)
G275250 NA other downstream 6074370 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 6366645 55068639 ~ 55122013 (-)
G284018 NA other upstream 1189302 62714575 ~ 62715177 (-)
G286522 NA other upstream 3444276 64969549 ~ 64970755 (-)
G286580 marco other upstream 3488986 65014259 ~ 65029736 (-)
G286638 NA other upstream 3529427 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 3709907 65235180 ~ 65235908 (-)

Expression



Co-expression Network