G282461


Basic Information

Item Value
gene id G282461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61536561 ~ 61536772 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320370
gtgTAGATAACAGGCACACTTTATATTTCAGTCCAAACGAAAGCACATAAGTTCATAAACGTGACCAAAACACGGAACATAAACAAAAGTCTGGCGCGTGACAATACCCACATAACATAAAACAATTTCACACAACGacatggaggggaacagaggactaaatgCATTCAGTGTGATTATGGAattaaaaccaggtgtgtatggaacaagac

Function

NR:

description
DNA-directed RNA polymerases I, II, and III subunit RPABC2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320370 True 212 lncRNA 0.39 1 61536561 61536772

Neighbor

gene id symbol gene type direction distance location
LOC110520316 itga4 coding upstream 31133 61475876 ~ 61505428 (+)
LOC110520315 ube2e3 coding upstream 165686 61331359 ~ 61370875 (+)
tgfbr2l LOC106586454 coding upstream 882248 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 1153209 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 1250481 60277245 ~ 60286080 (+)
LOC110504376 LOC106586465 coding downstream 53286 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 111933 61648705 ~ 61663408 (+)
LOC110520324 LOC106586470 coding downstream 236661 61773433 ~ 61832413 (+)
LOC110520325 LOC106586471 coding downstream 299893 61836665 ~ 61841206 (+)
LOC110520332 LOC106586482 coding downstream 584427 62121199 ~ 62126483 (+)
G282460 LOC106586556 non-coding upstream 1534 61534751 ~ 61535027 (+)
G282458 NA non-coding upstream 8306 61528014 ~ 61528255 (+)
G282417 NA non-coding upstream 25030 61506917 ~ 61511531 (+)
G282399 NA non-coding upstream 107982 61428283 ~ 61428579 (+)
G282387 NA non-coding upstream 126467 61409882 ~ 61410094 (+)
G282462 NA non-coding downstream 789 61537561 ~ 61537765 (+)
G282463 NA non-coding downstream 1183 61537955 ~ 61538220 (+)
G282467 NA non-coding downstream 4694 61541466 ~ 61541691 (+)
G282468 NA non-coding downstream 7434 61544206 ~ 61544451 (+)
G282469 NA non-coding downstream 8614 61545386 ~ 61545644 (+)
G281996 NA other upstream 499456 61033766 ~ 61037105 (+)
G281714 NA other upstream 642783 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 779211 60740239 ~ 60757350 (+)
G281141 NA other upstream 1245994 60287388 ~ 60303967 (+)
G280315 NA other upstream 1482144 60052716 ~ 60054417 (+)
G282707 il-1rii other downstream 420616 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 656832 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 830842 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1169559 62705451 ~ 62712740 (+)
G284313 NA other downstream 1479554 63016326 ~ 63022591 (+)

Expression


Co-expression Network