Gene
RNA
| Item | Value |
|---|---|
| gene id | G282469 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 61545386 ~ 61545644 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU320378 | True | 259 | lncRNA | 0.52 | 1 | 61545386 | 61545644 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520316 | itga4 | coding | upstream | 39958 | 61475876 ~ 61505428 (+) |
| LOC110520315 | ube2e3 | coding | upstream | 174511 | 61331359 ~ 61370875 (+) |
| tgfbr2l | LOC106586454 | coding | upstream | 891073 | 60634539 ~ 60654313 (+) |
| LOC118964303 | NA | coding | upstream | 1162034 | 60382674 ~ 60383352 (+) |
| myl1 | LOC100135947 | coding | upstream | 1259306 | 60277245 ~ 60286080 (+) |
| LOC110504376 | LOC106586465 | coding | downstream | 44414 | 61590058 ~ 61647253 (+) |
| LOC110520321 | LOC106586467 | coding | downstream | 103061 | 61648705 ~ 61663408 (+) |
| LOC110520324 | LOC106586470 | coding | downstream | 227789 | 61773433 ~ 61832413 (+) |
| LOC110520325 | LOC106586471 | coding | downstream | 291021 | 61836665 ~ 61841206 (+) |
| LOC110520332 | LOC106586482 | coding | downstream | 575555 | 62121199 ~ 62126483 (+) |
| G282468 | NA | non-coding | upstream | 935 | 61544206 ~ 61544451 (+) |
| G282467 | NA | non-coding | upstream | 3695 | 61541466 ~ 61541691 (+) |
| G282463 | NA | non-coding | upstream | 7166 | 61537955 ~ 61538220 (+) |
| G282462 | NA | non-coding | upstream | 7621 | 61537561 ~ 61537765 (+) |
| G282461 | NA | non-coding | upstream | 8614 | 61536561 ~ 61536772 (+) |
| G282475 | NA | non-coding | downstream | 7137 | 61552781 ~ 61553556 (+) |
| G282477 | NA | non-coding | downstream | 10309 | 61555953 ~ 61556172 (+) |
| G282478 | NA | non-coding | downstream | 10760 | 61556404 ~ 61556754 (+) |
| G282480 | NA | non-coding | downstream | 14828 | 61560472 ~ 61560815 (+) |
| G282481 | NA | non-coding | downstream | 15335 | 61560979 ~ 61561187 (+) |
| G281996 | NA | other | upstream | 508281 | 61033766 ~ 61037105 (+) |
| G281714 | NA | other | upstream | 651608 | 60891524 ~ 60893778 (+) |
| G281591 | LOC106586456 | other | upstream | 788036 | 60740239 ~ 60757350 (+) |
| G281141 | NA | other | upstream | 1254819 | 60287388 ~ 60303967 (+) |
| G280315 | NA | other | upstream | 1490969 | 60052716 ~ 60054417 (+) |
| G282707 | il-1rii | other | downstream | 411744 | 61957388 ~ 61964066 (+) |
| LOC110520339 | lrrc63 | other | downstream | 647960 | 62193287 ~ 62200069 (+) |
| LOC110520346 | htr2a | other | downstream | 821970 | 62367489 ~ 62408857 (+) |
| LOC110504398 | LOC106586506 | other | downstream | 1160687 | 62705451 ~ 62712740 (+) |
| G284313 | NA | other | downstream | 1470682 | 63016326 ~ 63022591 (+) |
