G283195


Basic Information

Item Value
gene id G283195
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61552148 ~ 61554728 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU321182
TTAGCTGCATGGATTAGTGTAGAATGTTACCCTGGTCCCTGTCTGCTAGCTGCATGGATTAGTGTAGAATGTTACCCTGGTCCCTGTCTGCAAACTGAGTGTATAATGTTACACATTAACAGGCTTTCCATTAACTCACCATGTGTATCCATGGAGACACCACCTTCTCGTCAACTCCTCTGCATAGATACCAGTCCCTCGCTCAACCTTGCTTGGTCAACAATGTTTTCTGTTGTTGGTCTTTGTATACTTAGTTGGGTGAGGTGGAGAAAACTTCCCCGTGGGCGAGTCAAGTCAATCAGTTAGAGGGTGAATTGTGTGGATGTAATGTAGTAATATGAAttagtgggtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagtaagggattgaggtgtgtgtgatggataCAGAAAGAAAGTGGATCAGGGAGTTGGTGATTGAGTGATTTAATTTGATCATGGAATATGGTAAGTAAGTTAGAtgagtaggagagaaagagagcatgaACAGTATGTTAGATGTAAGTAAATTAGTGTGAAAATAGTGTGTGAATGAGCATGTGTTATGTGGGAGAGCATATaatagggagtgtgtgtgtgttggctctcATCACCATGGGAGAGCggtagtgtgtgtatatctgtctcctttctctctgcggaggatgaaacagagagaagcagatgcTGTCCTCCGTAACAAAGGTATCACAGCCATATCACTTTCACTGGAGGGAGTACCAGTCCTGTCTTAGTGTATTCCCCCCCACAGACTGGacccttctgtctgtctttctgaccgcatctgtctgtctgtctctgtctctctgtctgactttaactgtctgtctgtctgtctgtctgtctgtctgcctgcctgtctgtctgtctgacttaaaactgtctgtgtgtctgtctgtctgtcttttttggGGGGCCTTGTCTGTCTGACTCACCAGACCCCACATTAGAGGTGTTATCAGTCAGTGTTGAAGCACAGAACACGTGTCGCTGTCTGACACATACACACCGCATTTATAAAAGAAAACCCACCAGCAATATAACACACAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAGGCACAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAACAGATGATTATCACCTACAGTGAAAACACACCAGCAATATAAACAGAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAACAGAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAACGGAGGATTATCACCTACAGTGAAAACACATATGCTGCTATGCATctcttcactgtactgtatgttttttttaaaatatattttggtttatAATGTACTTAGTGCTAATACATATTCAAAAAGTTCATAATGGTAACCTTTTGTGTTAGTAACCAGAGACACATTCCCGTTAGTCTTTTTGGATTATTTAATGATTTCCAAATAcagtatttgtttattttttgtattcatattttttttattgacccAAATCACATGCAGATAATGATTTCTATTATATTCACAACACAGTTATTATATTCACAACACAGTTGTTATATTCACAACACAGTTGTTATATTCACAACACAGTTATTATATTCACAACACAGTTATTATATTCACAACACAGTTGTTATATTCACAACACAGTTGTTATATTCACAACACAGTTATTATATTCACAACACAGTTATTATATTCACAACACAGTTGTTATATTCACAACAGTTATTATAGTCACAACACAGTTATTATAGTCACAACACAGTTGTTATATTCACAGCACAGTTATTATATTcacaactgtcacgttctgaccatagttctgttattttattctttgttttagtatggtcagggcgcgAGTTGGGGTgagcagtctatgtttgtttttctatgttcggtttctgtgttcggcctagtatggttctccatcagaggcaggtgtcgttagacAGTTGTctttgattgagaatcatacttaggtagcctgggtttcacttttggtttgtgggtgtttgtttccgtgtgtgtgtttgggccacacggtactgtttcggttttgtatatttcacgtttattattttgttccagtgttcagttgtgTTTTTTGAATAAATgcatatggacact
>TU321184
TCGTCAACTCCTCTGCATAGATACCAGTCCCTCGCTCAACCTTGCTTGGTCAACAATGTTTTCTGTTGTTGGTCTTTGTATACTTAGTTGGGTGAGGTGGAGAAAACTTCCCCGTGGGCGAGTCAAGTCAATCAGTTAGAGGGTGAATTGTGTGGATGTAATGTAGTAATATGAAttagtgggtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagtaagggattgaggtgtgtgtgatggataCAGAAAGAAAGTGGATCAGGGAGTTGGTGATTGAGTGATTTAATTTGATCATGGAATATGGTAAGTAAGTTAGAtgagtaggagagaaagagagcatgaACAGTATGTTAGATGTAAGTAAATTAGTGTGAAAATAGTGTGTGAATGAGCATGTGTTATGTGGGAGAGCATATaatagggagtgtgtgtgtgttggctctcATCACCATGGGAGAGCggtagtgtgtgtatatctgtctcctttctctctgcggaggatgaaacagagagaagcagatgcTGTCCTCCGTAACAAAGGTATCACAGCCATATCACTTTCACTGGAGGGAGTACCAGTCCTGTCTTAGTGTATTCCCCCCCACAGACTGGacccttctgtctgtctttctgaccgcatctgtctgtctgtctctgtctctctgtctgactttaactgtctgtctgtctgtctgtctgtctgtctgcctgcctgtctgtctgtctgacttaaaactgtctgtgtgtctgtctgtctgtcttttttggGGGGCCTTGTCTGTCTGACTCACCAGACCCCACATTAGAGGTGTTATCAGTCAGTGTTGAAGCACAGAACACGTGTCGCTGTCTGACACATACACACCGCATTTATAAAAGAAAACCCACCAGCAATATAACACACAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAGGCACAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAGGCACAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAACAGAGGATTATCACCTACAGTGAAAACACACCAGCAATATAAACGGAGGATTATCACCTACAGTGAAAACACATATGCTGCTATGCATctcttcactgtactgtatgttttttttaaaatatattttggtttatAATGTACTTAGTGCTAATACATATTCAAAAAGTTCATAATGGTAACCTTTTGTGTTAGTAACCAGAGACACATTCCCGTTAGTCTTTTTGGATTATTTAATGATTTCCAAATAcagtatttgtttattttttgtattcatattttttttattgacccAAATCACATGCAGATAATGATTTCTATTATATTCACAACACAGTTATTATATTCACAACACAGTTGTTATATTCACAACACAGTTGTTATATTCACAACACAGTTATTATATTCACAACACAGTTATTATATTCACAACACAGTTGTTATATTCACAACACAGTTGTTATATTCACAACACAGTTATTATATTCACAACACAGTTATTATATTCACAACACAGTTGTTATATTCACAACAGTTATTATAGTCACAACACAGTTATTATAGTCACAACACAGTTGTTATATTCACAGCACAGTTATTATATTcacaactgtcacgttctgaccatagttctgttattttattctttgttttagtatggtcagggcgcgAGTTGGGGTgagcagtctatgtttgtttttctatgttcggtttctgtgttcggcctagtatggttctccatcagaggcaggtgtcgttagacAGTTGTctttgattgagaatcatacttaggtagcctgggtttcacttttggtttgtgggtgtttgtttccgtgtgtgtgtttgggccacacggtactgtttcggttttgtatatttcacgtttattattttgttccagtgttcagttgtgTTTTTTGAATAAATgcatatggacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321182 False 2190 lncRNA 0.39 2 61552148 61554728
TU321184 True 1981 lncRNA 0.39 2 61552148 61554561

Neighbor

gene id symbol gene type direction distance location
LOC110520318 NA coding downstream 3896 61506974 ~ 61548252 (-)
LOC118964366 NA coding downstream 281576 61270516 ~ 61270572 (-)
LOC110520314 LOC106586461 coding downstream 297510 61202903 ~ 61254638 (-)
LOC110520312 LOC106586462 coding downstream 360275 61034879 ~ 61191873 (-)
LOC110520311 LOC106586460 coding downstream 538971 60974920 ~ 61013177 (-)
LOC110520317 ndf1 coding upstream 23851 61578579 ~ 61583060 (-)
LOC110520320 LOC106586468 coding upstream 108977 61663705 ~ 61728601 (-)
LOC110520322 LOC106586411 coding upstream 213775 61768503 ~ 61772972 (-)
il-1r1 il-1r1 coding upstream 335381 61890109 ~ 61916561 (-)
zmp:0000000936 LOC106586476 coding upstream 365166 61919894 ~ 61956548 (-)
G283184 NA non-coding downstream 17506 61534440 ~ 61534642 (-)
G283166 NA non-coding downstream 26875 61485857 ~ 61525273 (-)
G283114 NA non-coding downstream 46744 61503993 ~ 61505404 (-)
G283108 NA non-coding downstream 150742 61401186 ~ 61401406 (-)
G283105 NA non-coding downstream 153801 61398058 ~ 61398347 (-)
G283197 NA non-coding upstream 7435 61562163 ~ 61562391 (-)
G283198 NA non-coding upstream 13247 61567975 ~ 61568475 (-)
G283224 NA non-coding upstream 48029 61602757 ~ 61603197 (-)
G283251 NA non-coding upstream 88370 61643098 ~ 61647279 (-)
G283256 NA non-coding upstream 98597 61653325 ~ 61689575 (-)
G277749 LOC106586429 other downstream 3962965 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 4148573 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 4254386 57270782 ~ 57297762 (-)
G275250 NA other downstream 6140661 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 6432936 55068639 ~ 55122013 (-)
G284018 NA other upstream 1159847 62714575 ~ 62715177 (-)
G286522 NA other upstream 3414821 64969549 ~ 64970755 (-)
G286580 marco other upstream 3459531 65014259 ~ 65029736 (-)
G286638 NA other upstream 3499972 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 3680452 65235180 ~ 65235908 (-)

Expression


Co-expression Network