Gene
RNA
| Item | Value |
|---|---|
| gene id | G282475 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 61552781 ~ 61553556 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU320384 | True | 516 | lncRNA | 0.33 | 2 | 61552781 | 61553556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520316 | itga4 | coding | upstream | 47353 | 61475876 ~ 61505428 (+) |
| LOC110520315 | ube2e3 | coding | upstream | 181906 | 61331359 ~ 61370875 (+) |
| tgfbr2l | LOC106586454 | coding | upstream | 898468 | 60634539 ~ 60654313 (+) |
| LOC118964303 | NA | coding | upstream | 1169429 | 60382674 ~ 60383352 (+) |
| myl1 | LOC100135947 | coding | upstream | 1266701 | 60277245 ~ 60286080 (+) |
| LOC110504376 | LOC106586465 | coding | downstream | 36502 | 61590058 ~ 61647253 (+) |
| LOC110520321 | LOC106586467 | coding | downstream | 95149 | 61648705 ~ 61663408 (+) |
| LOC110520324 | LOC106586470 | coding | downstream | 219877 | 61773433 ~ 61832413 (+) |
| LOC110520325 | LOC106586471 | coding | downstream | 283109 | 61836665 ~ 61841206 (+) |
| LOC110520332 | LOC106586482 | coding | downstream | 567643 | 62121199 ~ 62126483 (+) |
| G282469 | NA | non-coding | upstream | 7137 | 61545386 ~ 61545644 (+) |
| G282468 | NA | non-coding | upstream | 8330 | 61544206 ~ 61544451 (+) |
| G282467 | NA | non-coding | upstream | 11090 | 61541466 ~ 61541691 (+) |
| G282463 | NA | non-coding | upstream | 14561 | 61537955 ~ 61538220 (+) |
| G282462 | NA | non-coding | upstream | 15016 | 61537561 ~ 61537765 (+) |
| G282477 | NA | non-coding | downstream | 2397 | 61555953 ~ 61556172 (+) |
| G282478 | NA | non-coding | downstream | 2848 | 61556404 ~ 61556754 (+) |
| G282480 | NA | non-coding | downstream | 6916 | 61560472 ~ 61560815 (+) |
| G282481 | NA | non-coding | downstream | 7423 | 61560979 ~ 61561187 (+) |
| G282483 | NA | non-coding | downstream | 9908 | 61563464 ~ 61563732 (+) |
| G281996 | NA | other | upstream | 515676 | 61033766 ~ 61037105 (+) |
| G281714 | NA | other | upstream | 659003 | 60891524 ~ 60893778 (+) |
| G281591 | LOC106586456 | other | upstream | 795431 | 60740239 ~ 60757350 (+) |
| G281141 | NA | other | upstream | 1262214 | 60287388 ~ 60303967 (+) |
| G280315 | NA | other | upstream | 1498364 | 60052716 ~ 60054417 (+) |
| G282707 | il-1rii | other | downstream | 403832 | 61957388 ~ 61964066 (+) |
| LOC110520339 | lrrc63 | other | downstream | 640048 | 62193287 ~ 62200069 (+) |
| LOC110520346 | htr2a | other | downstream | 814058 | 62367489 ~ 62408857 (+) |
| LOC110504398 | LOC106586506 | other | downstream | 1152775 | 62705451 ~ 62712740 (+) |
| G284313 | NA | other | downstream | 1462770 | 63016326 ~ 63022591 (+) |
