G282477


Basic Information

Item Value
gene id G282477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61555953 ~ 61556172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320388
CAGACAGGGACCCGGGAAACATTCTACACTAATCCATGCAGCTAACAGACAGGGACCAGGGTAACATTATACACTAATCCATGCAGCTAGCAGACAGGGACCAGGGTAACATTTTACACTAATCCATGCAGCTAACAGACAGGGACCAGGGTAACATTCTACACTAATCCATGCAGCTAGCAGGCAGAGACCAGGGTTACATTCTATACTAAGCCATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320388 True 220 lncRNA 0.47 1 61555953 61556172

Neighbor

gene id symbol gene type direction distance location
LOC110520316 itga4 coding upstream 50525 61475876 ~ 61505428 (+)
LOC110520315 ube2e3 coding upstream 185078 61331359 ~ 61370875 (+)
tgfbr2l LOC106586454 coding upstream 901640 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 1172601 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 1269873 60277245 ~ 60286080 (+)
LOC110504376 LOC106586465 coding downstream 33886 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 92533 61648705 ~ 61663408 (+)
LOC110520324 LOC106586470 coding downstream 217261 61773433 ~ 61832413 (+)
LOC110520325 LOC106586471 coding downstream 280493 61836665 ~ 61841206 (+)
LOC110520332 LOC106586482 coding downstream 565027 62121199 ~ 62126483 (+)
G282475 NA non-coding upstream 2397 61552781 ~ 61553556 (+)
G282469 NA non-coding upstream 10309 61545386 ~ 61545644 (+)
G282468 NA non-coding upstream 11502 61544206 ~ 61544451 (+)
G282467 NA non-coding upstream 14262 61541466 ~ 61541691 (+)
G282463 NA non-coding upstream 17733 61537955 ~ 61538220 (+)
G282478 NA non-coding downstream 232 61556404 ~ 61556754 (+)
G282480 NA non-coding downstream 4300 61560472 ~ 61560815 (+)
G282481 NA non-coding downstream 4807 61560979 ~ 61561187 (+)
G282483 NA non-coding downstream 7292 61563464 ~ 61563732 (+)
G282484 NA non-coding downstream 7951 61564123 ~ 61565350 (+)
G281996 NA other upstream 518848 61033766 ~ 61037105 (+)
G281714 NA other upstream 662175 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 798603 60740239 ~ 60757350 (+)
G281141 NA other upstream 1265386 60287388 ~ 60303967 (+)
G280315 NA other upstream 1501536 60052716 ~ 60054417 (+)
G282707 il-1rii other downstream 401216 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 637432 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 811442 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1150159 62705451 ~ 62712740 (+)
G284313 NA other downstream 1460154 63016326 ~ 63022591 (+)

Expression


Co-expression Network