G282484


Basic Information

Item Value
gene id G282484
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61564123 ~ 61565350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320397
CTGTTACAAAAATATCCAATATATTTAGAGGAAATAAAGATAATCTCCCCCGATTGACTAAATGAGCTGGCTGCAGACAGGGTCCAATGACAAACAGGGCATTATTTACAACAGTGATATATTAGGATACAAGGGAAAAGGCACTCAGaaaagggggtagagaggggggatagTTTGAGGCTTTAGAAAGGGGGAGAGTCCCCCTCACCCGTTTCCTTCCCTCCAGTAATACAGTGATGTacaagggaaggagggggggaagGGGGGATTACAGTAAACTGGTGCTGGCGCCCTGTCCTGTCTGGATCAATCTAGGCACATCTGCCTGATTCCGACCATAAACAGGATTATAGGGGGACTTATCTGCTTGACGCTAATTGTTTTCGCAGTTTATGCACAAGCCAACTCTTTCAGGTGCTGCAACTCGGCATATAAAAACTCCATACACAGTGGTTGGCTGCCCGTGACTTCTTTCAGGCACAGGTCCATTCATAAAGTTGGCTGAGTTGTTTGGAACTTATTTTCGGTTATTTAGGGGTTTGGCAGGGGTTTGAATCTGTGAAACTAATTAGTGTAATGTTTTGGATTTGGACATTGCTGGTTTGGATGGGATGTATTGTCACACTGTGCATAGGCAATATAATGATATAGAGAGATGTGTCATGGCATTGAATTGCAACTTAATAACATGTTCATGTATTTGTATATTCTGCAGAGGATGTGGAGTATTGTGGAGAAATTATAAATGTTTTCAAATTTTATCTATCTTCTTAAAGTCTTTGAAGTCCTTGAAGTGAAACAGACATTGCAAAAAAAGGATTACTTACTACTATTAACAACTAGTCATTATGTTACAACTAGGGCTTTCAGAGTTAATCAGTttcgaagtcgatgcctctccttgttcgagcgGTGTTCGGTGTTCTAgtcatcgccgatccatttttcattttccatttgttttgtctcgttttACCACACAActggttctcatttccctcattatgtgttgtgtatttaaccctatgttccccccatgtctttgtgtggtattgtttattgtaagtgcacaTTTTGTTTGACTGGTGCGCGTCGAGTTATTTGTGCCCATAATTTGTATTTCTTATGCCGTTGGTTTtactattaaactgctccggctattatcaagttctgctctcctgcgtctgacttccctgccaccagatACGCACCACTTACAGAATACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320397 True 1228 lncRNA 0.41 1 61564123 61565350

Neighbor

gene id symbol gene type direction distance location
LOC110520316 itga4 coding upstream 58695 61475876 ~ 61505428 (+)
LOC110520315 ube2e3 coding upstream 193248 61331359 ~ 61370875 (+)
tgfbr2l LOC106586454 coding upstream 909810 60634539 ~ 60654313 (+)
LOC118964303 NA coding upstream 1180771 60382674 ~ 60383352 (+)
myl1 LOC100135947 coding upstream 1278043 60277245 ~ 60286080 (+)
LOC110504376 LOC106586465 coding downstream 24708 61590058 ~ 61647253 (+)
LOC110520321 LOC106586467 coding downstream 83355 61648705 ~ 61663408 (+)
LOC110520324 LOC106586470 coding downstream 208083 61773433 ~ 61832413 (+)
LOC110520325 LOC106586471 coding downstream 271315 61836665 ~ 61841206 (+)
LOC110520332 LOC106586482 coding downstream 555849 62121199 ~ 62126483 (+)
G282483 NA non-coding upstream 391 61563464 ~ 61563732 (+)
G282481 NA non-coding upstream 2936 61560979 ~ 61561187 (+)
G282480 NA non-coding upstream 3308 61560472 ~ 61560815 (+)
G282478 NA non-coding upstream 7369 61556404 ~ 61556754 (+)
G282477 NA non-coding upstream 7951 61555953 ~ 61556172 (+)
G282486 NA non-coding downstream 3359 61568709 ~ 61569133 (+)
G282538 NA non-coding downstream 88200 61653550 ~ 61654197 (+)
G282560 NA non-coding downstream 128185 61693535 ~ 61698383 (+)
G282634 NA non-coding downstream 276463 61841813 ~ 61843829 (+)
G282658 NA non-coding downstream 279940 61845290 ~ 61849674 (+)
G281996 NA other upstream 527018 61033766 ~ 61037105 (+)
G281714 NA other upstream 670345 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 806773 60740239 ~ 60757350 (+)
G281141 NA other upstream 1273556 60287388 ~ 60303967 (+)
G280315 NA other upstream 1509706 60052716 ~ 60054417 (+)
G282707 il-1rii other downstream 392038 61957388 ~ 61964066 (+)
LOC110520339 lrrc63 other downstream 628254 62193287 ~ 62200069 (+)
LOC110520346 htr2a other downstream 802264 62367489 ~ 62408857 (+)
LOC110504398 LOC106586506 other downstream 1140981 62705451 ~ 62712740 (+)
G284313 NA other downstream 1450976 63016326 ~ 63022591 (+)

Expression


Co-expression Network