G282907


Basic Information

Item Value
gene id G282907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62303483 ~ 62320393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU320878
gtgcaaaggattagcatttcaattaatataattatcaactgtttGTGTGAATCtattttgtctttcccactctttctcagtccccagaactttcctttgtctaccaagccgtcatatcagcTTTGTCGGCTAGGGACTTTTTCTTTGTATCACGTAGGAACCCAAATATcttctgtttgtttgttattgtcacgccctgatttgtttcacctgtccttgtgattgtctccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320878 True 232 lncRNA 0.39 2 62303483 62320393

Neighbor

gene id symbol gene type direction distance location
LOC110520345 NA coding upstream 16665 62281719 ~ 62286818 (+)
LOC110520344 sucla2 coding upstream 30654 62254960 ~ 62272829 (+)
med4 med4 coding upstream 48672 62249459 ~ 62254811 (+)
LOC110520341 LOC106586488 coding upstream 99733 62200831 ~ 62203750 (+)
LOC110520339 lrrc63 coding upstream 103414 62193287 ~ 62200069 (+)
LOC110520346 htr2a coding downstream 47096 62367489 ~ 62408857 (+)
LOC110520349 lrch1 coding downstream 103027 62423414 ~ 62430935 (+)
rubcnl rubcnl coding downstream 214253 62534646 ~ 62542031 (+)
dhrs12 LOC106586499 coding downstream 223184 62543577 ~ 62547782 (+)
LOC110504388 LOC106586502 coding downstream 278284 62598677 ~ 62612475 (+)
G282815 LOC106575914 non-coding upstream 129121 62164883 ~ 62174362 (+)
G282822 NA non-coding upstream 131591 62169746 ~ 62171892 (+)
G282743 NA non-coding upstream 141524 62113060 ~ 62161959 (+)
G282786 NA non-coding upstream 173371 62126644 ~ 62130112 (+)
LOC110520332 LOC106586482 non-coding upstream 178420 62121199 ~ 62126483 (+)
G282976 NA non-coding downstream 88830 62409223 ~ 62409441 (+)
G283779 NA non-coding downstream 196408 62516801 ~ 62518422 (+)
G283802 LOC106613263 non-coding downstream 256090 62576483 ~ 62577684 (+)
G283800 NA non-coding downstream 258062 62578455 ~ 62579127 (+)
G282707 il-1rii other upstream 342008 61957388 ~ 61964066 (+)
G281996 NA other upstream 1266378 61033766 ~ 61037105 (+)
G281714 NA other upstream 1409705 60891524 ~ 60893778 (+)
G281591 LOC106586456 other upstream 1546133 60740239 ~ 60757350 (+)
LOC110504398 LOC106586506 other downstream 385938 62705451 ~ 62712740 (+)
G284313 NA other downstream 695933 63016326 ~ 63022591 (+)
LOC110520364 LOC106586514 other downstream 805497 63124380 ~ 63129015 (+)
G284537 NA other downstream 946726 63267119 ~ 63312394 (+)

Expression


Co-expression Network