G283817


Basic Information

Item Value
gene id G283817
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62649487 ~ 62650344 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU321851
tgttggaggccactgtgttcttggggaccttcaacgctgcagcaatgttttggtatccttacCCAGATCTgcacctcgacacaatcctgtctcggagctctcgGGATAAttccttggtttttgctctgacatgcactaacAATTGTGgaacctttatatagacaggtgtgtgcattttcaaatcatgtccaatcaagttatgaaaacatctcaaggatgatcaattgaaacaggatgcacctgagctcaattttgagtctcatagcaagggtctgaatacttacactaccgttcaaaagtttggtgtcacttagaattattattattatatatttttttaaagaaaagcacattttttgtccattaaaataacatcatgttgatcagaaatagtgtagccatttttaatggaatatctacataggtgtacagaggcccattatcagcaaccatcactcttgtgttccaatggcacgttgtgttagctaatcctagTTTATACATTTTAagaggctaattgatcattagaaaacccttttgcaattctgttagcacagctgaaaactgttgttctgtttaaagaagcaataaaactggcctttagactcaTTGAGTATGtgtagcatcagcatttgtgtgttcgattacaggctcaaaatggccagaaacaaagcactttcttctgaaacctgTCAGTctcttcttgttctgagaaatgaaggctattccatgcgagaaattgccaacaaactgaagatctcatacaatgctgtgtactactcccttcatagaacagggcaaactggctttagccagaatagaaagaggagtgggaggtgcacaactgagcaagaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321851 True 858 lncRNA 0.39 1 62649487 62650344

Neighbor

gene id symbol gene type direction distance location
LOC110520352 LOC106586504 coding upstream 972 62622919 ~ 62648515 (+)
LOC110504388 LOC106586502 coding upstream 37012 62598677 ~ 62612475 (+)
dhrs12 LOC106586499 coding upstream 101705 62543577 ~ 62547782 (+)
rubcnl rubcnl coding upstream 107456 62534646 ~ 62542031 (+)
LOC110520349 lrch1 coding upstream 223187 62423414 ~ 62430935 (+)
LOC118964306 LOC106586506 coding downstream 48543 62698887 ~ 62701213 (+)
LOC110504398 LOC106586506 coding downstream 55107 62705451 ~ 62712740 (+)
LOC110520355 LOC105016359 coding downstream 132902 62770924 ~ 62815230 (+)
LOC118964307 NA coding downstream 207869 62858213 ~ 62860498 (+)
LOC110520359 LOC106586511 coding downstream 296974 62947318 ~ 63007919 (+)
G283800 NA non-coding upstream 70360 62578455 ~ 62579127 (+)
G283802 LOC106613263 non-coding upstream 71803 62576483 ~ 62577684 (+)
G283779 NA non-coding upstream 131065 62516801 ~ 62518422 (+)
G283833 NA non-coding downstream 4586 62654930 ~ 62655154 (+)
G283836 NA non-coding downstream 13036 62663380 ~ 62663709 (+)
G283840 NA non-coding downstream 19867 62670211 ~ 62670488 (+)
G283860 NA non-coding downstream 62799 62713143 ~ 62713848 (+)
G283859 NA non-coding downstream 64512 62714856 ~ 62715183 (+)
LOC110520346 htr2a other upstream 240630 62367489 ~ 62408857 (+)
LOC110520339 lrrc63 other upstream 452536 62193287 ~ 62200069 (+)
G282707 il-1rii other upstream 688012 61957388 ~ 61964066 (+)
G281996 NA other upstream 1612382 61033766 ~ 61037105 (+)
G281714 NA other upstream 1755709 60891524 ~ 60893778 (+)
G284313 NA other downstream 365982 63016326 ~ 63022591 (+)
LOC110520364 LOC106586514 other downstream 475546 63124380 ~ 63129015 (+)
G284537 NA other downstream 616775 63267119 ~ 63312394 (+)
G284599 NA other downstream 740587 63390931 ~ 63391284 (+)

Expression


Co-expression Network