G283836


Basic Information

Item Value
gene id G283836
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62663380 ~ 62663709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU321871
catgcacactaataattcaatattaaactgattatggcagtaggccgagtatggcattagtcatgtaaacaccttactcttcTTATCTTAATCGGTTTAAGGTCATAAACGAAGTAAGCATACACTGATTataacacctggttttctgagcaatctttcaaattattaggacatgtaaataACTTAATCAGAGTTCAagcggtgtatttgatctgcacaTGTGGCAGCACCAGATCACCAACCTCCCTCTTATGTGCAAGTGAAGTAAGTTCAGAACAACTGAAAGCATGCATCTTAGAAATAGTTTGcacatacaaactttatatgCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321871 True 330 lncRNA 0.37 1 62663380 62663709

Neighbor

gene id symbol gene type direction distance location
LOC110520352 LOC106586504 coding upstream 14865 62622919 ~ 62648515 (+)
LOC110504388 LOC106586502 coding upstream 50905 62598677 ~ 62612475 (+)
dhrs12 LOC106586499 coding upstream 115598 62543577 ~ 62547782 (+)
rubcnl rubcnl coding upstream 121349 62534646 ~ 62542031 (+)
LOC110520349 lrch1 coding upstream 237080 62423414 ~ 62430935 (+)
LOC118964306 LOC106586506 coding downstream 35178 62698887 ~ 62701213 (+)
LOC110504398 LOC106586506 coding downstream 41742 62705451 ~ 62712740 (+)
LOC110520355 LOC105016359 coding downstream 119537 62770924 ~ 62815230 (+)
LOC118964307 NA coding downstream 194504 62858213 ~ 62860498 (+)
LOC110520359 LOC106586511 coding downstream 283609 62947318 ~ 63007919 (+)
G283833 NA non-coding upstream 8226 62654930 ~ 62655154 (+)
G283817 NA non-coding upstream 13036 62649487 ~ 62650344 (+)
G283800 NA non-coding upstream 84253 62578455 ~ 62579127 (+)
G283802 LOC106613263 non-coding upstream 85696 62576483 ~ 62577684 (+)
G283840 NA non-coding downstream 6502 62670211 ~ 62670488 (+)
G283860 NA non-coding downstream 49434 62713143 ~ 62713848 (+)
G283859 NA non-coding downstream 51147 62714856 ~ 62715183 (+)
G283867 NA non-coding downstream 58586 62722295 ~ 62722740 (+)
G284045 NA non-coding downstream 84719 62748428 ~ 62750633 (+)
LOC110520346 htr2a other upstream 254523 62367489 ~ 62408857 (+)
LOC110520339 lrrc63 other upstream 466429 62193287 ~ 62200069 (+)
G282707 il-1rii other upstream 701905 61957388 ~ 61964066 (+)
G281996 NA other upstream 1626275 61033766 ~ 61037105 (+)
G281714 NA other upstream 1769602 60891524 ~ 60893778 (+)
G284313 NA other downstream 352617 63016326 ~ 63022591 (+)
LOC110520364 LOC106586514 other downstream 462181 63124380 ~ 63129015 (+)
G284537 NA other downstream 603410 63267119 ~ 63312394 (+)
G284599 NA other downstream 727222 63390931 ~ 63391284 (+)

Expression


Co-expression Network