Gene
RNA
| Item | Value |
|---|---|
| gene id | G284012 |
| gene name | LOC106586506 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 62703779 ~ 62704102 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: matrix-remodeling-associated protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU322059 | True | 324 | lncRNA | 0.51 | 1 | 62703779 | 62704102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520350 | LOC106586501 | coding | downstream | 108080 | 62547867 ~ 62595699 (-) |
| trnal-caa-2 | NA | coding | downstream | 160450 | 62543221 ~ 62543329 (-) |
| trnal-caa | NA | coding | downstream | 161081 | 62542589 ~ 62542698 (-) |
| LOC110520347 | lrch1 | coding | downstream | 170472 | 62425684 ~ 62533307 (-) |
| LOC110520342 | itm2b | coding | downstream | 454278 | 62231915 ~ 62249501 (-) |
| LOC110520353 | LOC106586507 | coding | upstream | 44322 | 62748424 ~ 62780312 (-) |
| LOC110520357 | asmt | coding | upstream | 128806 | 62832908 ~ 62841097 (-) |
| LOC110520356 | LOC106586509 | coding | upstream | 137358 | 62841460 ~ 62853914 (-) |
| LOC110520358 | LOC106586406 | coding | upstream | 151777 | 62855879 ~ 62858995 (-) |
| LOC110504409 | sh3rf3 | coding | upstream | 165646 | 62869748 ~ 62943518 (-) |
| G283998 | NA | non-coding | downstream | 33379 | 62670174 ~ 62670400 (-) |
| G283992 | NA | non-coding | downstream | 48013 | 62655557 ~ 62655766 (-) |
| G283991 | NA | non-coding | downstream | 48902 | 62653440 ~ 62654877 (-) |
| G283990 | NA | non-coding | downstream | 50670 | 62652678 ~ 62653109 (-) |
| G283989 | NA | non-coding | downstream | 51128 | 62652041 ~ 62652651 (-) |
| G284023 | NA | non-coding | upstream | 20919 | 62725021 ~ 62726045 (-) |
| G284040 | NA | non-coding | upstream | 38419 | 62742521 ~ 62742930 (-) |
| G284162 | NA | non-coding | upstream | 130392 | 62834494 ~ 62836044 (-) |
| G284213 | NA | non-coding | upstream | 150481 | 62854583 ~ 62854787 (-) |
| G284217 | NA | non-coding | upstream | 158651 | 62862753 ~ 62864090 (-) |
| G277749 | LOC106586429 | other | downstream | 5114596 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 5300204 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 5406017 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 7292292 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 7584567 | 55068639 ~ 55122013 (-) |
| G284018 | NA | other | upstream | 10473 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 2265447 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 2310157 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 2350598 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 2531078 | 65235180 ~ 65235908 (-) |
