G283860


Basic Information

Item Value
gene id G283860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62713143 ~ 62713848 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU321896
TTACAGCCATAGTGTGTTATGCATCTTACAGCCATAGTGTGTTATGCATCTTACAGCCATAGTGTGTTATGCATCTTACAGCCATAGTGTGTTACACATCTTACAGCCATAGTGTGTTATGCATCTTACAGCCATAGTGTGTTATGCATCTTACAGCCATAGTGTGAGTTATAAAAGCAATGGGCAGCTCTGAGAAGCAACTGCATCATTCAACAACAAGAAATAGTGTCAACATCACAGACTATATCAGGGAGTAAAAACATCAGCTGTTGCAATACACATCATGCAACATGCAACATATTCAGCTCTGTATTACAACCTTTATGAACTTTTACCTCCATAATATCTAAAATGGC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU321896 True 356 lncRNA 0.38 3 62713143 62713848

Neighbor

gene id symbol gene type direction distance location
LOC110504398 LOC106586506 coding upstream 403 62705451 ~ 62712740 (+)
LOC118964306 LOC106586506 coding upstream 11930 62698887 ~ 62701213 (+)
LOC110520352 LOC106586504 coding upstream 64628 62622919 ~ 62648515 (+)
LOC110504388 LOC106586502 coding upstream 100668 62598677 ~ 62612475 (+)
dhrs12 LOC106586499 coding upstream 165361 62543577 ~ 62547782 (+)
LOC110520355 LOC105016359 coding downstream 69398 62770924 ~ 62815230 (+)
LOC118964307 NA coding downstream 144365 62858213 ~ 62860498 (+)
LOC110520359 LOC106586511 coding downstream 233470 62947318 ~ 63007919 (+)
LOC110520363 NA coding downstream 399819 63113667 ~ 63119407 (+)
LOC110520364 LOC106586514 coding downstream 410532 63124380 ~ 63129015 (+)
G283840 NA non-coding upstream 42655 62670211 ~ 62670488 (+)
G283836 NA non-coding upstream 49434 62663380 ~ 62663709 (+)
G283833 NA non-coding upstream 57989 62654930 ~ 62655154 (+)
G283817 NA non-coding upstream 62799 62649487 ~ 62650344 (+)
G283859 NA non-coding downstream 1008 62714856 ~ 62715183 (+)
G283867 NA non-coding downstream 8447 62722295 ~ 62722740 (+)
G284045 NA non-coding downstream 34580 62748428 ~ 62750633 (+)
G284057 NA non-coding downstream 50073 62763921 ~ 62768887 (+)
LOC110520346 htr2a other upstream 304286 62367489 ~ 62408857 (+)
LOC110520339 lrrc63 other upstream 516192 62193287 ~ 62200069 (+)
G282707 il-1rii other upstream 751668 61957388 ~ 61964066 (+)
G281996 NA other upstream 1676038 61033766 ~ 61037105 (+)
G284313 NA other downstream 302478 63016326 ~ 63022591 (+)
G284537 NA other downstream 553271 63267119 ~ 63312394 (+)
G284599 NA other downstream 677083 63390931 ~ 63391284 (+)
G284986 LOC106586530 other downstream 992720 63706568 ~ 63722064 (+)

Expression


Co-expression Network