G284291


Basic Information

Item Value
gene id G284291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62971484 ~ 63020713 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU322403
AAGAGACAGCTTAGAAACAACCACCACCACTGTTGATTAGAATAATTACGGTACCAGTCTGTGAGTCTTCATCAGGGAGTATGTGTAGGTTTAGGGCTGCATTAGTTACAATCACAGTTAACACAGTAATAACACTAGTAGTTAGTACCCACCATTCCCAGTGGAAATGCCATATACACACCTTGGCTGGCTTGGAGGTGGCTTTTTTCTCAGGTTTGGACTCAATGGCCTTCTGACAAacgttctctctccccttctgtgcCATGGAGTATTCATACttcctctagagagagagagaaaatcacaTGTAAATGAACAGACACTATGTATAGGGGTTGAGGGTCTAAATAACACAGGTCTATTTAGCTTGTTGTGTGTCTTCCTACCTGAAGGTTCTCTAGCCGAGCCTGGACCTTCCTGAACTGGTTCTCCAGACGCTTGTTCTGCTCACTCAGCTCATTCAGCTGAACACAATACAATGATATAATACAAACAGTTAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322403 True 502 lncRNA 0.43 2 62971484 63020713

Neighbor

gene id symbol gene type direction distance location
LOC118964307 NA coding upstream 110986 62858213 ~ 62860498 (+)
LOC110520355 LOC105016359 coding upstream 158403 62770924 ~ 62815230 (+)
LOC110504398 LOC106586506 coding upstream 258744 62705451 ~ 62712740 (+)
LOC118964306 LOC106586506 coding upstream 270271 62698887 ~ 62701213 (+)
LOC110520352 LOC106586504 coding upstream 322969 62622919 ~ 62648515 (+)
LOC110520363 NA coding downstream 92954 63113667 ~ 63119407 (+)
LOC110520364 LOC106586514 coding downstream 103667 63124380 ~ 63129015 (+)
LOC110520366 akap11 coding downstream 152523 63173236 ~ 63204595 (+)
LOC110520367 tnfsf11 coding downstream 204540 63225253 ~ 63234657 (+)
lacc1 lacc1 coding downstream 428647 63414756 ~ 63457571 (+)
G284206 NA non-coding upstream 35387 62933377 ~ 62936097 (+)
G284198 NA non-coding upstream 52246 62918481 ~ 62919238 (+)
G284174 NA non-coding upstream 107756 62862746 ~ 62863728 (+)
G284096 NA non-coding upstream 139070 62832079 ~ 62832414 (+)
G284095 NA non-coding upstream 139847 62831419 ~ 62831637 (+)
G284345 NA non-coding downstream 46236 63066949 ~ 63067154 (+)
G284346 NA non-coding downstream 46512 63067225 ~ 63067470 (+)
G284355 NA non-coding downstream 55035 63075748 ~ 63076164 (+)
G284366 NA non-coding downstream 76273 63096986 ~ 63097218 (+)
LOC110520346 htr2a other upstream 562627 62367489 ~ 62408857 (+)
LOC110520339 lrrc63 other upstream 774533 62193287 ~ 62200069 (+)
G282707 il-1rii other upstream 1010009 61957388 ~ 61964066 (+)
G281996 NA other upstream 1934379 61033766 ~ 61037105 (+)
G284537 NA other downstream 246406 63267119 ~ 63312394 (+)
G284599 NA other downstream 370218 63390931 ~ 63391284 (+)
G284986 LOC106586530 other downstream 685855 63706568 ~ 63722064 (+)
G285001 NA other downstream 722293 63743006 ~ 63745493 (+)

Expression


Co-expression Network