G284355


Basic Information

Item Value
gene id G284355
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63075748 ~ 63076164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU322476
gctcattctgcgtgtgatttcctgcaagacatgaatgtcattgttctgccatggccaacgaagagcaaggatctcaatcccattgagcacgtctgggacctgttggatcagagggtgagggctagaaatgtccaggaacttgcaggtgccttgggggaagagtggggtaacatctcacagcaagaactggcaaacctggtgcagtccatgaggaggagatgcactgcagtacttaatacagctggtggccacaccagatactgactgttacttttgattttgaccacccctttgttcagggacacattattccatttctgttagtcacatgtctgtggaacgttttcagtttgtctcagttgttgaatcttgttgttcatacaaatatttacacatgttaagtttgctgaaaataag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322476 True 417 lncRNA 0.45 1 63075748 63076164

Neighbor

gene id symbol gene type direction distance location
LOC110520359 LOC106586511 coding upstream 67829 62947318 ~ 63007919 (+)
LOC118964307 NA coding upstream 215250 62858213 ~ 62860498 (+)
LOC110520355 LOC105016359 coding upstream 262667 62770924 ~ 62815230 (+)
LOC110504398 LOC106586506 coding upstream 363008 62705451 ~ 62712740 (+)
LOC118964306 LOC106586506 coding upstream 374535 62698887 ~ 62701213 (+)
LOC110520363 NA coding downstream 37503 63113667 ~ 63119407 (+)
LOC110520364 LOC106586514 coding downstream 48216 63124380 ~ 63129015 (+)
LOC110520366 akap11 coding downstream 97072 63173236 ~ 63204595 (+)
LOC110520367 tnfsf11 coding downstream 149089 63225253 ~ 63234657 (+)
lacc1 lacc1 coding downstream 373196 63414756 ~ 63457571 (+)
G284346 NA non-coding upstream 8278 63067225 ~ 63067470 (+)
G284345 NA non-coding upstream 8594 63066949 ~ 63067154 (+)
G284291 NA non-coding upstream 55035 62971484 ~ 63020713 (+)
G284206 NA non-coding upstream 139651 62933377 ~ 62936097 (+)
G284198 NA non-coding upstream 156510 62918481 ~ 62919238 (+)
G284366 NA non-coding downstream 20822 63096986 ~ 63097218 (+)
G284471 NA non-coding downstream 54013 63130177 ~ 63130380 (+)
G284473 NA non-coding downstream 56109 63132273 ~ 63132581 (+)
G284535 NA non-coding downstream 181199 63257363 ~ 63257713 (+)
G284313 NA other upstream 53157 63016326 ~ 63022591 (+)
LOC110520346 htr2a other upstream 666891 62367489 ~ 62408857 (+)
LOC110520339 lrrc63 other upstream 878797 62193287 ~ 62200069 (+)
G282707 il-1rii other upstream 1114273 61957388 ~ 61964066 (+)
G284537 NA other downstream 190955 63267119 ~ 63312394 (+)
G284599 NA other downstream 314767 63390931 ~ 63391284 (+)
G284986 LOC106586530 other downstream 630404 63706568 ~ 63722064 (+)
G285001 NA other downstream 666842 63743006 ~ 63745493 (+)

Expression


Co-expression Network