G284453



Basic Information


Item Value
gene id G284453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63083029 ~ 63083228 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU322586
tacaAATAGAACTATGGTTCCaaaacctgtaggtaggtaggactgggttctgaatGGAGTGTTCAGAGCTTCTGATCTTTTCTATAACTGGTAAGGAACATAATATATGGTCTAttcttggcatgtaggtttctcacttacgggtggcacaaattgggatatggggaggggaatgggcaaggtatatgcaaattaaatac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU322586 True 200 lncRNA 0.41 1 63083029 63083228

Neighbor


gene id symbol gene type direction distance location
LOC110520361 LOC106586409 coding downstream 26296 63028878 ~ 63056733 (-)
LOC110520360 LOC106586512 coding downstream 57748 63011134 ~ 63025281 (-)
LOC110504409 sh3rf3 coding downstream 139511 62869748 ~ 62943518 (-)
LOC110520358 LOC106586406 coding downstream 224034 62855879 ~ 62858995 (-)
LOC110520356 LOC106586509 coding downstream 229115 62841460 ~ 62853914 (-)
chmp2ba chmp2b coding upstream 16846 63100074 ~ 63115360 (-)
LOC118944692 NA coding upstream 81066 63164294 ~ 63167048 (-)
epsti1 epsti1 coding upstream 183890 63267118 ~ 63282972 (-)
LOC110520368 LOC106582175 coding upstream 236620 63319848 ~ 63436412 (-)
LOC110520372 tsc22d1 coding upstream 444615 63527843 ~ 63601105 (-)
G284452 NA non-coding downstream 1473 63081354 ~ 63081556 (-)
G284448 LOC105357840 non-coding downstream 11404 63070626 ~ 63071625 (-)
G284267 NA non-coding downstream 146894 62933280 ~ 62936135 (-)
G284258 NA non-coding downstream 163784 62918506 ~ 62919245 (-)
G284244 NA non-coding downstream 179889 62902316 ~ 62903140 (-)
G284457 NA non-coding upstream 4723 63087951 ~ 63089637 (-)
G284458 NA non-coding upstream 6575 63089803 ~ 63090207 (-)
G284472 NA non-coding upstream 48044 63131272 ~ 63131493 (-)
G284474 NA non-coding upstream 49085 63132313 ~ 63132556 (-)
G284481 NA non-coding upstream 57884 63141112 ~ 63141319 (-)
G284018 NA other downstream 367852 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 5493846 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 5679454 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 5785267 57270782 ~ 57297762 (-)
G275250 NA other downstream 7671542 55410143 ~ 55411487 (-)
G286522 NA other upstream 1886321 64969549 ~ 64970755 (-)
G286580 marco other upstream 1931031 65014259 ~ 65029736 (-)
G286638 NA other upstream 1971472 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 2151952 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 2214979 65298207 ~ 65300417 (-)

Expression



Co-expression Network