G284537


Basic Information

Item Value
gene id G284537
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63267119 ~ 63312394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU322683
GTATCGTGTTGAACAGCGATTTATTAAACACAGCCCTGGATAGCTGACCCAAACATTACAATACTAATTCAATCAGGGAAACATCTGAAGAATACAAAGTGAAAAGTCAAACATCTCAGCGAAACCAGAGGTGACACAGAACATGAAGACCCAACATATTATCTAATAGGACACACCAAGGGAGACGGTCTATTGTTGTCCATCATACAGATGACAAACCCTTGTAATGGATAGCCAACATGTTATTGTGATTAGCCTTtatacagagaaacagaaaacagGACAGATGTTTCCATAACAACACAATGAGCTTGTTAAAAGCCAAATGGATATAAAGATGCTGACTCATCCTAGTGACCTACAACTCATTTGTAAAAAAACATCCTAAATCAATGTCAGACACAATGGAGCAATTTGTAATTTGTGCTGAAGAAATGAAGTAGTTTCACTCTATTATTATTACTAAGATATTACCTTTCACAATAGTATCATTACTTGATCCAATAGATATTGTCAAGTTTCACAATATTATCATTATTACGGAATCAAGTTTCACAATTCTACTATTACTTTCAAGGTTCACTAGTACTAGATGAAGATATGAGGAAGATTCAGCACTAAAAGTTAATACACAAGGGTTATCATTAGACTTACACACATGCCTGTTGGTAGTCTCCGCAACACTAGATAAGTAAGTCATAGGCCTGTTGATAGTCTCCGTTACACTGAATGACGATGTCCTCCAGAAAGGGTCTCTCACAGAACGGGAAGCTATTCTGAAGCTTCATCACAACCCACTCAAAGTCTGGATCTGgaggagagaaaaacagagttcagtgttacattttacatttatgcACATGTATGATTTTTCCAGTCATATTAGGTAACAAAGTTATCCTTTGTTGCGGTCTCTTGACAAGCCTGGGAAAGCAAGACAACTGCTCTCATGGAGTTTTATACCACACACAGTGTATGATCCTTTAGTTCTGaatacagatgcaggatcttaatttcaAATgtatattgtcacagcaaaataatcctgcagcaacaggatttgaacgctttgtccataatgttgcttgattggTGGTTTGGCTATTAGCcggccaaaagtaggctacatgaaaagtgcaatactgttaatataaccatgtgttaatgtgggttttcagtgaatttatgtgattcacgaagctcatctgcatttccagTTGGAACAttttcagcaacaaaagagtgatcaaattaagatcctacatctgtatctaAATGCTGGGGTATGGAGACAGAGGTACCATATCCTGACCTATCAAACCCTAAATGAAAACTGTATATTTCTTCTGTATACAGCTGGATCTGTGCAACAGATGCCGTCGAATTTAGACTTGACTTTAGACCACTTTATGAGTTATGAAACGTTTTGATTTTGGATGAATGTTCCTTGTAATGAGAAACGATGACAGAGCTCTGCTTTGTATTCTAAACACCAAAGCCTCATCCAAtcccacacacatacatgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcagacaagACATAAGGATGACAGTCTCATCCCAGACCAAGCCCGTTCACTGCAGTCTGAGAGGACACTCCCATGACGCTCTCTGCTGGGTCATCTGGTTCAGCCAGGAAGGATAGATGAccggagaagagagagagagaggggggtgggggtggagagaaagaaaaataagAAACACTGATCTTCCACCATAGTCATTCTGATCCAACCTGATCCTCCAACTAACCACAATATAGCAGTCCCTgatcacatacacacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgagcagggcAGTGTGAGGAGCCTGGAGGGAGAGGTCATCAGCCAGCCAGGAGGAGATTAGGAGTGTTATGGTGGTGAAGGACTAGCATCCTCTTTATATCCTAATCACCACGGCCATTTAGCCAACAGATGCTTTTCTCCAAAACTATTTCCAGTTGACAACTGGACTCTGTACATTAGACCCTAATGAGGGTGGTTACTGAACATGGCCATTTACAACAGCTATCGGATCCAAGTTGACGGGTGTCTCCAGGATCAACCCGCAACCCTGgcatcgaacccacaaccctggcaacGAACCCAAAACCCTGgcatcgaacccacaaccctggcatcgaacccacaaccctggcaacGAACCCAAAACCCTGGCATGGAACCCACAACCAtggcatcgaacccacaaccctggcaacAGACCCAAAACCCTGgtatcgaacccacaaccctggcatcgaacccacaaccctggcatcgAATCCACAACCCTGGCaacaaacccaaaaccctggcaTCGAACCCAAAACCCTGGCatcgaacccacaatcctggcatcgaacccacaaccctggcattgaaCCCATAACCCTGGCAACGAACCCAAAACCCTGGCATCGAACGCACAACCCTGgcatcaaacccacaaccctggcaacGAACCCAAAACCCTGGcatcgaacccacaaccttggcaGCGAACCCACAACCCCGGGATCGAACCTACAACCCTTTCATCAAACCCCCAACCCCGGCATGGAACCCAAAAGCCTGgcatcaaacccacaaccctggcattgccaGGCCCATGCTCCAAACCACTGAGCCATCCAAGCCAGTTCACAGGCTGCTGCTAACTGGTTAGAAAGGATGAATGGCGTTGCTTTGTCAGGGATGATGGCTGAGATAGTTTGGCCAGGCAAAGCTCTGCACTGACAGGCAGAAAACTATGTGTACTGTGATGACAGCTGGGTTCGAACCCAGGTCTCCTGCGAAACCCACTGAGCAAAGCCTAGGCATTGCCTTGGGTAACTAATGCAAGTTTTCATGGGTGCGATGTGACCTTGAGAGCAAAAGTATTTTACAGATGTGATGACAAGTAACAGTAGTTCCTAAAGTGAACTGGTCCTGAAGTGAACTGgtcctcccgt
>TU322685
GTATCGTGTTGAACAGCGATTTATTAAACACAGCCCTGGATAGCTGACCCAAACATTACAATACTAATTCAATCAGGGAAACATCTGAAGAATACAAAGTGAAAAGTCAAACATCTCAGCGAAACCAGAGGTGACACAGAACATGAAGACCCAACATATTATCTAATAGGACACACCAAGGGAGACGGTCTATTGTTGTCCATCATACAGATGACAAACCCTTGTAATGGATAGCCAACATGTTATTGTGATTAGCCTTtatacagagaaacagaaaacagGACAGATGTTTCCATAACAACACAATGAGCTTGTTAAAAGCCAAATGGATATAAAGATGCTGACTCATCCTAGTGACCTACAACTCATTTGTAAAAAAACATCCTAAATCAATGTCAGACACAATGGAGCAATTTGTAATTTGTGCTGAAGAAATGAAGTAGTTTCACTCTATTATTATTACTAAGATATTACCTTTCACAATAGTATCATTACTTGATCCAATAGATATTGTCAAGTTTCACAATATTATCATTATTACGGAATCAAGTTTCACAATTCTACTATTACTTTCAAGGTTCACTAGTACTAGATGAAGATATGAGGAAGATTCAGCACTAAAAGTTAATACACAAGGGTTATCATTAGACTTACACACATGCCTGTTGGTAGTCTCCGCAACACTAGATAAGTAAGTCATAGGCCTGTTGATAGTCTCCGTTACACTGAATGACGATGTCCTCCAGAAAGGGTCTCTCACAGAACGGGAAGCTATTCTGAAGCTTCATCACAACCCACTCAAAGTCTGGATCTGgaggagagaaaaacagagttcagtgttacattttacatttatgcACATGTATGATTTTTCCAGTCATATTAGGTAACAAAGTTATCCTTTGTTGCGGTCTCTTGACAAGCCTGGGAAAGCAAGACAACTGCTCTCATGGAGTTTTATACCACACACAGTGTATGATCCTTTAGTTCTGaatacagatgcaggatcttaatttcaAATgtatattgtcacagcaaaataatcctgcagcaacaggatttgaacgctttgtccataatgttgcttgattggTGGTTTGGCTATTAGCcggccaaaagtaggctacatgaaaagtgcaatactgttaatataaccatgtgttaatgtgggttttcagtgaatttatgtgattcacgaagctcatctgcatttccagTTGGAACAttttcagcaacaaaagagtgatcaaattaagatcctacatctgtatctaAATGCTGGGGTATGGAGACAGAGGTACCATATCCTGACCTATCAAACCCTAAATGAAAACTGTATATTTCTTCTGTATACAGCTGGATCTGTGCAACAGATGCCGTCGAATTTAGACTTGACTTTAGACCACTTTATGAGTTATGAAACGTTTTGATTTTGGATGAATGTTCCTTGTAATGAGAAACGATGACAGAGCTCTGCTTTGTATTCTAAACACCAAAGCCTCATCCAAtcccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcagacaagACATAAGGATGACAGTCTCATCCCAGACCAAGCCCGTTCACTGCAGTCTGAGAGGACACTCCCATGACGCTCTCTGCTGGGTCATCTGGTTCAGCCAGGAAGGATAGATGAccggagaagagagagagagaggggggtgggggtggagagaaagaaaaataagAAACACTGATCTTCCACCATAGTCATTCTGATCCAACCTGATCCTCCAACTAACCACAATATAGCAGTCCCTgatcacatacacacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgagcagggcAGTGTGAGGAGCCTGGAGGGAGAGGTCATCAGCCAGCCAGGAGGAGATTAGGAGTGTTATGGTGGTGAAGGACTAGCATCCTCTTTATATCCTAATCACCACGGCCATTTAGCCAACAGATGCTTTTCTCCAAAACTATTTCCAGTTGACAACTGGACTCTGTACATTAGACCCTAATGAGGGTGGTTACTGAACATGGCCATTTACAACAGCTATCGGATCCAAGTTGACGGGTGTCTCCAGGATCAACCCGCAACCCTGgcatcgaacccacaaccctggcaacGAACCCAAAACCCTGgcatcgaacccacaaccctggcatcgaacccacaaccctggcaacGAACCCAAAACCCTGGCATGGAACCCACAACCATGgcatcgaacccacaaccctggcatcgaacccacaaccctggcaacAGACCCAAAACCCTGgtatcgaacccacaaccctggcatcgaacccacaaccctggcatcgAATCCACAACCCTGGCaacaaacccaaaaccctggcaTCGAACCCAAAACCCTGGCatcgaacccacaatcctggcatcgaacccacaaccctggcattgaaCCCATAACCCTGGCAACGAACCCAAAACCCTGGCATCGAACGCACAACCCTGgcatcaaacccacaaccctggcaacGAACCCAAAACCCTGGcatcgaacccacaaccttggcaGCGAACCCACAACCCCGGGATCGAACCTACAACCCTTTCATCAAACCCCCAACCCCGGCATGGAACCCAAAAGCCTGgcatcaaacccacaaccctggcattgccaGGCCCATGCTCCAAACCACTGAGCCATCCAAGCCAGTTCACAGGCTGCTGCTAACTGGTTAGAAAGGATGAATGGCGTTGCTTTGTCAGGGATGATGGCTGAGATAGTTTGGCCAGGCAAAGCTCTGCACTGACAGGCAGAAAACTATGTGTACTGTGATGACAGCTGGGTTCGAACCCAGGTCTCCTGCGAAACCCACTGAGCAAAGCCTAGGCATTGCCTTGGGTAACTAATGCAAGTTTTCATGGGTGCGATGTGACCTTGAGAGCAAAAGTATTTTACAGATGTGATGACAAGTAACAGTAGTTCCTAAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGGAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAATTGTTCCTGGAGTGGACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTAAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGACTTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAATTGTTCCTGGAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGACGTGAACTGGTCCTGAAGTGAATTGTTCCTAAAGTGAACTGGTCCCGAAGTGAACTGTTCCTAGAGTGAACTGGTCCTGAAGTGAATTGTTCCTAGAGTGAACTGTTCCCGACGTGAACTGTTCCTAAAGTGAACTGGTCCTGAAGTGAATTGTTCCTAAAGTGAACTGGTCCCGAAGTGAACTGTTCCTAGAGTGAACTGTTCCCGACGTGAATTATTCCTAAAGTGAACTGGTCCCGAAGTGAACTGTTCCCGACGTGAATTGTTCCCGAAGTGAACTGTTCTTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGTTCCCGAAGTGAACTATTCCTTAAGTGAACTGTTCTTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAATTGTTCCCGAAGTGAACTATTCCTTAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGTTCCTGAAGTGAACTGTTCCTAGAGTGAACTGTTCCCGACGTGAACTGTTCCTAAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGACGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAATTGTTCCCGAAGTGAACTATTCCTTAAGTGAACTATTCCTTAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGTAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTAGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTACTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTAGAGTGAACTGTTCCCGACGTGAACTGTTCCTAAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAATTGTTCCCGAAGTGAACTATTCCTTAAGTGAACTATTCCTTAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGTTCCTGAAGTAAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAATTGTTCCTGAAGTGAACTGTTCCTGAAGTGAACTGGTCTTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGATGTGAACTGGTCCTGAAGTGAACTGGTCCTGATGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGATGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGAAGTGAACTGGTCCTGATGTGAACAGTGAAATCCAACAGAAATAAGCTCAAGCATCAGATGCCATCAGCTACAGATGCCCAGGAACGTGGGAAGGGAATCAAAGCGTACCTTTGTTATGATGAAACTCTAGTCAACAGAACATCTGCTCCTGTCCTGCTGCTGCTATGTGGGCTTTGGCAATGGCTGCTGCCATTGATGGGTTCATTTAAAGGGTTTAGTCttctgcacaaacacacacacacacacacatctgaagaCTGCACACCTTGGCACCAGGATAATGAAATAATGTCAGAAGCATCTGTAAGAAGTGTTTCAAGCCCTGACCACTGGAATGTCTCTGACACATTGATTCATACATTATTTTGGAATTGTATTTCCACTACACTGTATTATTGCCTTTTTTGTAGATAGGGGGCAGTGGTCAAAGTGGCCCATGGAGAGTGAGTTGAGAGCCGTGAAGTCATTCccgactctctctctgacagcttgGCTCAGAGACACCAGAATTTCCCTCCCTTACTGACAGATTGTAATTAACGGTACCCAGTGTGcaagtgtgtatgtgtacgtgcaTCCGTGTGTGTCTTACTGGTCTCCTCTCGCCACTCTGAGGTGCTGTGTGTTGGGTCAGGCTCCGGGGATGTAAAGGTGTCTTGTGGTCGGGAGGTCTGGCTATGGGTCTGCCAGCCACTCCTGTCCTCCCCCAAAGCCACAGGGGGGCGCTGTAGCTCATTCTGCCCCCCTGCAACCTCTGTGCCCCCACCCTGCAGTCGGTCGAGGAAAGCTGATCTCCCCCTGCCACCAGACATAATCATTTGTGTGTTATAAAATGTATGTGTTTCCTTGGAATGTATTCAGTATGTTTCTATGCTAATGTTTGTAACGCTGCAAGCAACATCTCCTTTACAGGGATAATAGTATATTTTAAACTATTAAAAAGAGATTAGAATTATCAACAGATTACAGGCCGTCCAGCCAACTACTACAAAATAAATAAGGGAACAATGTCTAAACAGATCACTCAACATAAAAAAAATGACAACTAGGTTTGAACATTGTTGTAAAAATGAGCACACCTTCTCaattctctcatcctctcctcctcttgattactctctttctcctccaaaaCCTCACTCTGAGGGGAAGAACATGGATTGGTACTGCACCCATAACTGAACTGTAGTTTCATTCCTGCTTGGGCTACATATACCGATAACATTTGTTAGCAATGGTTGTATATTTGACAGGCTACCTTCATCCTCTGTTCCTCCTTCTTCAGCTGTAGAGcggtgttctcctcctctctcctctctgacctgtattCCTGGGCTCTGGCCCAGGGTGATGTGTGTGAGGCACTAGTCACTGCCAATGGAGCTGCATCTGACCTCTCCACCCTCTGAAGGAACTGCTTTGTCTTCCtgcaaatcacacacacacaaacacacacagtggtgtTAATGTTTTCTGCAGACACTCCTGATTCTCCCTCACAGAGTGGTCACCTAGTCTGTTTGTCCTGGTCTGACTCTCACTGTCTTCATCCTCTTTCCTGTCCTGTGTCTCAGTCCTCTGTCCTAACGGTCCTGTCCCCGTCTCAGTCCTCTGTCCTAACGGTCCTGTCCCCGTCTCAGTCCTCTGTCCTAACGGTCCTTTCTCCGTCTCAGTCCTCTGTCCTAACGGTCCTGTCCCCGTCTCAGTCCCATCTGTAGCCCCGTCATCTGTACTCTGTAactgcctctcctctctttaccccTGACTCCAA

Function

NR:

description
Ice nucleation protein inaU

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322683 False 3130 TUCP 0.45 3 63267119 63312394
TU322685 True 7270 lncRNA 0.46 4 63267119 63277329

Neighbor

gene id symbol gene type direction distance location
LOC110520367 tnfsf11 coding upstream 32462 63225253 ~ 63234657 (+)
LOC110520366 akap11 coding upstream 62524 63173236 ~ 63204595 (+)
LOC110520364 LOC106586514 coding upstream 138104 63124380 ~ 63129015 (+)
LOC110520363 NA coding upstream 147712 63113667 ~ 63119407 (+)
LOC110520359 LOC106586511 coding upstream 259200 62947318 ~ 63007919 (+)
lacc1 lacc1 coding downstream 172031 63414756 ~ 63457571 (+)
serp2 NA coding downstream 242475 63519786 ~ 63525770 (+)
gtf2f2b LOC105016382 coding downstream 348511 63625840 ~ 63682242 (+)
LOC118944562 LOC106562846 coding downstream 610929 63888258 ~ 63889211 (+)
LOC110504443 fbxo47 coding downstream 617336 63894665 ~ 63900193 (+)
G284535 NA non-coding upstream 9406 63257363 ~ 63257713 (+)
G284473 NA non-coding upstream 134538 63132273 ~ 63132581 (+)
G284471 NA non-coding upstream 136739 63130177 ~ 63130380 (+)
G284366 NA non-coding upstream 169901 63096986 ~ 63097218 (+)
G284560 NA non-coding downstream 35469 63312798 ~ 63313826 (+)
G284561 NA non-coding downstream 41109 63318438 ~ 63320782 (+)
G284575 enox1 non-coding downstream 71339 63348668 ~ 63352511 (+)
G284582 NA non-coding downstream 84558 63361887 ~ 63362372 (+)
G284591 NA non-coding downstream 102799 63380128 ~ 63380363 (+)
G284313 NA other upstream 244528 63016326 ~ 63022591 (+)
LOC110504398 LOC106586506 other upstream 560149 62705451 ~ 62712740 (+)
LOC110520346 htr2a other upstream 858262 62367489 ~ 62408857 (+)
LOC110520339 lrrc63 other upstream 1070168 62193287 ~ 62200069 (+)
G284599 NA other downstream 113602 63390931 ~ 63391284 (+)
G284986 LOC106586530 other downstream 429239 63706568 ~ 63722064 (+)
G285001 NA other downstream 465677 63743006 ~ 63745493 (+)
G285203 NA other downstream 794103 64071432 ~ 64083982 (+)
G285763 NA other downstream 1029183 64306512 ~ 64307360 (+)

Expression


Co-expression Network