G284689


Basic Information

Item Value
gene id G284689
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63317266 ~ 63318062 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU322849
TTTTATTCCTTATTCCTGTtaaagcatattggatgactgtatTCATATTCCATACACCCAGTActatgtaacagcgataggttaaGGCTACTACGTGATACTATTAATttgccctatacccatcatgagattCCTACAACCTCGCCTACGAATGACAGTTtataacgtaggtgcacacaggtcgagagacaaattggagtaatcaaggtgacggacagtgacacattcaataccgccttgcacactcttgcctgcatctaactGATCTGGgatgtaatcattagtcagaACAGCTGCAAACaacagtttctattggacaaattcaggttggTTCGTTCCGTTTAAGaaaagtttttcaacagaatcggcagaatgaatacacccctgatcacccgcacacacacttcactttcatagcagccacatacaaacagcatcgTCACTTTACATCactcgttgtataattccttctcgcatctacacgctctcctcctctcaccttttcccttcagtgcacaacacaaagGCTCTCTGTAACCGTCCGAAAAAGAAAAgaaaccttcataccataaccgctacacacagtctacatcgttgtcaccatattaggtaatgtcatagtcaacatagctactagaactaatgcattagtaaacccgctacaatcacgcagtacagtatgcagcaagcagtttagcagttacaccggggggccccggtggcaataaataaataaaaccgaAAGCTTACCTTAACTTGGaaaagttccagtgttggatagctttagccagctagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322849 True 797 lncRNA 0.42 1 63317266 63318062

Neighbor

gene id symbol gene type direction distance location
epsti1 epsti1 coding downstream 34294 63267118 ~ 63282972 (-)
LOC118944692 NA coding downstream 150218 63164294 ~ 63167048 (-)
chmp2ba chmp2b coding downstream 201906 63100074 ~ 63115360 (-)
LOC110520361 LOC106586409 coding downstream 260533 63028878 ~ 63056733 (-)
LOC110520360 LOC106586512 coding downstream 291985 63011134 ~ 63025281 (-)
LOC110520368 LOC106582175 coding upstream 1786 63319848 ~ 63436412 (-)
LOC110520372 tsc22d1 coding upstream 209781 63527843 ~ 63601105 (-)
LOC110520374 kctd4 coding upstream 331113 63649175 ~ 63650920 (-)
LOC118964309 kctd4 coding upstream 341634 63659696 ~ 63661441 (-)
LOC110504432 tpt1 coding upstream 364408 63682470 ~ 63688255 (-)
G284729 NA non-coding downstream 44658 63270467 ~ 63272608 (-)
G284731 NA non-coding downstream 45490 63271494 ~ 63271776 (-)
G284669 NA non-coding downstream 154471 63162562 ~ 63162795 (-)
G284666 NA non-coding downstream 158556 63158416 ~ 63158710 (-)
G284481 NA non-coding downstream 175947 63141112 ~ 63141319 (-)
G284775 NA non-coding upstream 67188 63385250 ~ 63385463 (-)
G284778 NA non-coding upstream 71458 63389520 ~ 63389759 (-)
G284779 NA non-coding upstream 72982 63391044 ~ 63391399 (-)
G284780 NA non-coding upstream 74034 63392096 ~ 63392327 (-)
G284797 NA non-coding upstream 96694 63414756 ~ 63457553 (-)
G284018 NA other downstream 602089 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 5728083 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 5913691 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 6019504 57270782 ~ 57297762 (-)
G275250 NA other downstream 7905779 55410143 ~ 55411487 (-)
G286522 NA other upstream 1651487 64969549 ~ 64970755 (-)
G286580 marco other upstream 1696197 65014259 ~ 65029736 (-)
G286638 NA other upstream 1736638 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 1917118 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 1980145 65298207 ~ 65300417 (-)

Expression


Co-expression Network