G284780



Basic Information


Item Value
gene id G284780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63392096 ~ 63392327 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU322944
cctgtaccttggccccacgtctctggattatcaacccctgcctgccttgacctgtcgtttgcctacCCCTGTTCttgcaataaacattgttacttcaacacagtctgcacttggatCTTACCAGAAACCTGatacaggtcacacatcttgctgctgggattgcacactgtggtatttcacccaatcaGTGGCGGCTGTAGGCATGGGCAGCCCCCTAGGACGGCATATTGCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU322944 True 232 lncRNA 0.52 1 63392096 63392327

Neighbor


gene id symbol gene type direction distance location
epsti1 epsti1 coding downstream 109124 63267118 ~ 63282972 (-)
LOC118944692 NA coding downstream 225048 63164294 ~ 63167048 (-)
chmp2ba chmp2b coding downstream 276736 63100074 ~ 63115360 (-)
LOC110520361 LOC106586409 coding downstream 335363 63028878 ~ 63056733 (-)
LOC110520360 LOC106586512 coding downstream 366815 63011134 ~ 63025281 (-)
LOC110520372 tsc22d1 coding upstream 135516 63527843 ~ 63601105 (-)
LOC110520374 kctd4 coding upstream 256848 63649175 ~ 63650920 (-)
LOC118964309 kctd4 coding upstream 267369 63659696 ~ 63661441 (-)
LOC110504432 tpt1 coding upstream 290143 63682470 ~ 63688255 (-)
LOC118964356 NA coding upstream 304686 63697013 ~ 63697211 (-)
G284779 NA non-coding downstream 697 63391044 ~ 63391399 (-)
G284778 NA non-coding downstream 2337 63389520 ~ 63389759 (-)
G284775 NA non-coding downstream 6633 63385250 ~ 63385463 (-)
G284689 NA non-coding downstream 74034 63317266 ~ 63318062 (-)
G284729 NA non-coding downstream 119488 63270467 ~ 63272608 (-)
G284797 NA non-coding upstream 22429 63414756 ~ 63457553 (-)
G284848 NA non-coding upstream 101743 63494070 ~ 63494497 (-)
G284855 NA non-coding upstream 106944 63499271 ~ 63499570 (-)
G284861 NA non-coding upstream 115259 63507586 ~ 63507794 (-)
G285277 NA non-coding upstream 129400 63521727 ~ 63522017 (-)
G284018 NA other downstream 676919 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 5802913 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 5988521 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 6094334 57270782 ~ 57297762 (-)
G275250 NA other downstream 7980609 55410143 ~ 55411487 (-)
G286522 NA other upstream 1577222 64969549 ~ 64970755 (-)
G286580 marco other upstream 1621932 65014259 ~ 65029736 (-)
G286638 NA other upstream 1662373 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 1842853 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 1905880 65298207 ~ 65300417 (-)

Expression



Co-expression Network