G284855



Basic Information


Item Value
gene id G284855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63499271 ~ 63499570 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU323027
cctctgagactatcacagtgcagttgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtataggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU323027 True 300 lncRNA 0.35 1 63499271 63499570

Neighbor


gene id symbol gene type direction distance location
LOC110520368 LOC106582175 coding downstream 62859 63319848 ~ 63436412 (-)
epsti1 epsti1 coding downstream 216299 63267118 ~ 63282972 (-)
LOC118944692 NA coding downstream 332223 63164294 ~ 63167048 (-)
chmp2ba chmp2b coding downstream 383911 63100074 ~ 63115360 (-)
LOC110520361 LOC106586409 coding downstream 442538 63028878 ~ 63056733 (-)
LOC110520372 tsc22d1 coding upstream 28273 63527843 ~ 63601105 (-)
LOC110520374 kctd4 coding upstream 149605 63649175 ~ 63650920 (-)
LOC118964309 kctd4 coding upstream 160126 63659696 ~ 63661441 (-)
LOC110504432 tpt1 coding upstream 182900 63682470 ~ 63688255 (-)
LOC118964356 NA coding upstream 197443 63697013 ~ 63697211 (-)
G284848 NA non-coding downstream 4774 63494070 ~ 63494497 (-)
G284797 NA non-coding downstream 41718 63414756 ~ 63457553 (-)
G284780 NA non-coding downstream 106944 63392096 ~ 63392327 (-)
G284779 NA non-coding downstream 107872 63391044 ~ 63391399 (-)
G284778 NA non-coding downstream 109512 63389520 ~ 63389759 (-)
G284861 NA non-coding upstream 8016 63507586 ~ 63507794 (-)
G285277 NA non-coding upstream 22157 63521727 ~ 63522017 (-)
G285338 NA non-coding upstream 148646 63648216 ~ 63660422 (-)
LOC110520378 LOC106586545 non-coding upstream 367613 63867161 ~ 63875738 (-)
G285444 NA non-coding upstream 451887 63951457 ~ 63953643 (-)
G284018 NA other downstream 784094 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 5910088 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 6095696 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 6201509 57270782 ~ 57297762 (-)
G275250 NA other downstream 8087784 55410143 ~ 55411487 (-)
G286522 NA other upstream 1469979 64969549 ~ 64970755 (-)
G286580 marco other upstream 1514689 65014259 ~ 65029736 (-)
G286638 NA other upstream 1555130 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 1735610 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 1798637 65298207 ~ 65300417 (-)

Expression



Co-expression Network