G285338


Basic Information

Item Value
gene id G285338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63648216 ~ 63660422 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU323553
GATAGAGGGGaagactgggagagaggggggcaggtaCAGTAGGTAGTGAGGGAAACAAGAGGGAGACGAAGGgatgagggaaggagaaaggTGTCTGATTCCAGATTGACACCTAGCCCCTAGATTGAAACTGACGCAGGACAGTCATTTCTGTGCACTTTGTCTGGAGTCCAACCTCAGAGTCAAGAGAGAGATCATCCACCCTCACTGCTGCAGGACAGAACACAACCTCTCAGAGGACCAGTCCCCTACTGAATTACGCATACATAAGCTGCTGTTTCCATCCAGGCTGCTTCCCCTTCAAACCAGCCTTAGTGCACCGTGAGGTATTACATTGTGTGTTTTCGGTTGCTGTGTTTTGAGTGGAGTTGTGTGACCAAGCCTTTCTCTGGATTCTgaggggagaggtACAGTTGAACACTATACCTCTGACTGACTGTTGCTGATCATTGGACAAAAAAACTATTGTTTAATTGCAGTAACTTGCCTGACTAGATGGAAGGGAGGTCAGTGTGAATGCCCTGCAGCAGAGAAGCACAGAGAGTTTAGACCCAAAGGTTCAAATCTAGCATGATGCATGTGCAGTGAAGATTTTCAAATCAGACACCAACATTGTGATTGTAAGTGCTGTGAGTGAGTATGTGACAATGTGTGTTATTTTGGAAATGTGAATGTTTTGTTTCACACAAAATAAAAGTCATGAATATCGGCATGATTATATTATCTAATATTTTCCACAAGTCATGCTGGCATTTGTGTCTACtctattatatacagtacaaggGGACTTGTATATCATATTTAATTGCATCAACATTATGACAGTTGATTAAGGCAGACAGAGCTGACCATAGCGCTTTAATAGAATAGACTGGGAACTAATGTATCAGACGTAGAACTGTAACAGAGTTAGCTTAGTTAGTTAACTTAGAAAGTCAGCTTAGTGTACTGGAACATGCATCCGTGCCCAACATCCCAGAGCAGTCACCTCAAACCAAACATACAGATTTAGGATCTTAATCACCGTTGCAGAACCTTCTTTCATTCAGGAAAAGTAAAACATGAAGTGTATTTGAGGCTTAAAAAAAAGCTTCTGAAGTttataatttccactttgaaatttcagacttgtaTCAACCCgtacaaaaatgtaaattatttataatccatataataattcacatttcctgtttctaaaggattattttcctgctgtagcaaactggctcaaattaagatcctacatctgtaatgtAATAACCTACCAGGAGGGATCATAATCAAATCTGAACTCCTATATTAAATCTCTTTTCCCATTTCACTACATTTATcatttttttacattatttttatttaacctttatttaactgggcaagtcagttaagaacaaattcttatttacaatgacggccaaacccggccaaacctggatgacgctgggccaattgtgcaccgtcctatgggactcccaatcacggccagacaTGATACAggctggactcgaaccagggactgtaatgacgcctgaaatgcagtgctttagaccgctgcgccactcgggagcccaatgttATAAGCCAACATTTCATATAGGAAGTGATCACTGGTGAGTGAGGTTAGTGATTGACAGCTGTGCAGGTGTCTTCATCCCAGGGCCTCTAGGATTTATGCTCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU323553 True 1677 lncRNA 0.42 2 63648216 63660422

Neighbor

gene id symbol gene type direction distance location
LOC110520372 tsc22d1 coding downstream 47111 63527843 ~ 63601105 (-)
LOC110520368 LOC106582175 coding downstream 211804 63319848 ~ 63436412 (-)
epsti1 epsti1 coding downstream 365244 63267118 ~ 63282972 (-)
LOC118944692 NA coding downstream 481168 63164294 ~ 63167048 (-)
chmp2ba chmp2b coding downstream 532856 63100074 ~ 63115360 (-)
LOC110504432 tpt1 coding upstream 22048 63682470 ~ 63688255 (-)
LOC118964356 NA coding upstream 36591 63697013 ~ 63697211 (-)
LOC118964310 LOC106586530 coding upstream 46146 63706568 ~ 63710488 (-)
LOC118964357 NA coding upstream 51017 63711439 ~ 63711637 (-)
LOC110520375 LOC106586530 coding upstream 60572 63720994 ~ 63742610 (-)
G285277 NA non-coding downstream 126199 63521727 ~ 63522017 (-)
G284861 NA non-coding downstream 140422 63507586 ~ 63507794 (-)
G284855 NA non-coding downstream 148646 63499271 ~ 63499570 (-)
G284848 NA non-coding downstream 153719 63494070 ~ 63494497 (-)
G284797 NA non-coding downstream 190663 63414756 ~ 63457553 (-)
LOC110520378 LOC106586545 non-coding upstream 206761 63867161 ~ 63875738 (-)
G285444 NA non-coding upstream 291035 63951457 ~ 63953643 (-)
G285445 NA non-coding upstream 294988 63955410 ~ 63955880 (-)
G285466 NA non-coding upstream 331692 63992114 ~ 63992941 (-)
G285582 NA non-coding upstream 514465 64174887 ~ 64175108 (-)
G284018 NA other downstream 933039 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 6059033 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 6244641 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 6350454 57270782 ~ 57297762 (-)
G275250 NA other downstream 8236729 55410143 ~ 55411487 (-)
G286522 NA other upstream 1309127 64969549 ~ 64970755 (-)
G286580 marco other upstream 1353837 65014259 ~ 65029736 (-)
G286638 NA other upstream 1394278 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 1574758 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 1637785 65298207 ~ 65300417 (-)

Expression


Co-expression Network