G285077


Basic Information

Item Value
gene id G285077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63867183 ~ 63914056 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU323274
TCACATATTCATCACCATAATTGTTATGGACACTGCATAAGTAATAAATAAATTCTTAGCTTTTATTTCTCCTCACCAAAAGGATAAATCATTTCTAACGTTGCATTAAAAAGTATGATCCATTTGTTCATATGCTGACTTTGTTGGTATATACATGTATCACacaaaaatatacatttccaTTTACAACATAGAAGCACATTTAGTACAGCCAGCCGAGCAACTGACATGATTATGTTTCTTATTCTTTAGTTTAAACAATGATATATTTTCCAGTGATAGAAGATAAAACAGCACAGAGTCGTCTCcttggtgaaggagaggagactttACATTCACATTTTGTACAGATTGCCTGGACACACAATTCCACTCTGACACTTAGAATATAGCATCAGGCCAGCATCAGACCAGCTCCCAATACTCCCAAAACGACCCATATTAAGGGCATAATTCAACAGATTCAAACAGATTCAAACTATAACTTAAGACTGTAAACACCAGCAGACCTTACCAGCAAATACAGTGGGAGGAGTCAACCAGAGAACAGAAATACCCTACAACATCAAATAACAACTGCAATTTCCATCACAATCTCAAATCTGTTTTCTCTGACCAACGTTTTGGTCAACAGACCTTCCTCAGTGTTCACCCATCAAACTGTAATAACTGTGATAACAGATAGGTAGCTAATTCACTCAGCATAGGACCAGCTCTGCTTCCAATCACTACAACCACTGACACCAAAACAACTAATGCTGTTATTTTCCTGTCTCAGCTCATAACCAGCAAAAAACACTAATCAAATGTCCTCAGGGCAGATGGACAGAGTGGACAGAGCAGAATTTAATTGATCGTGCCAACGGGTTATTGATACAATCCCTGGAGGGGAAATCACAACTCAGCCTCCACAAGCCCCCCTGCCGCTCTGCTGCCGCTCTGCAGTCAATGACAGTTTAGAGGGGAATAAACCATCATGGGGCaactctcaaatggcaccttattccctgtatacactacactacccaaACGTATgtggctctggccaaaagtagtgcactacataggtaatagggtgtAATTTTGGGAAGCAGATGGACTACCTAAAGCCACAGCCAGGTCCAATTTCAACCAGTACACCCATTAATAAAGCATTAAAGGCTTGTTCACCTATATTACTAACACATATTGAGTAAAACCTGGCCCTTATAATCTGATATAAGACTGTGAAATAAAGCAAGCGTTCCCCTCCAACACAATAGCACAGTATTAAACTTCTACACCTGCAGAGAGGAGGATTTTGGCACATGCACAACATGGAACAGAATTTGGGTTTGGCTTTTCAACCCTGTTCAAATCCAGTTACTATGAAAATAATGTTAGTACTGAATATTTTAACCTGTACCTGGTGATTGTGTGTAAATTGGATTAAGAGCGCACAATTTAAAAATAGCTTGAAATCTATTTGTTCTCAATAATTAAAAAACAATCAACGGTTTTGAATGACTGATATTCATATCTAGATCTATGTACAGCATGGACTCTAAAATCATTATTGCTCTATTAGTAAATTAATTATAAGTACATTTTTAcgaacacacacaaacgcacaaacacacaaacacacacacacttaaatatTGCACTATTCTCATCACCCTCTGGGCTGGCGTCCCTCTCAGACCTCcctagtgagagagacagacagacagttatctgTAAACTCTTGTGGACAGATATCTGCTCGTAAACCATATCATCTTTTGTGAAGGGATTGGATGCATTGGACAACAAGCAGCAGTAGTTCCAGTGTTTGGGTTTTCGTCACTGGTTATTTGAATGTATCAGGATTGGGAAAAGGCGGTGCTTAAACTGCTTCGCTTCTACTGCTTCGCATGTGTGCTTTGGCTTTGCAAACTGAAAATGTTCCATTTCTAACACATAACCACGCAGCTGAAATTACGTAGGATTTAAATTCTGGGTTAACCAAGATCAGTTACCTTACCTTTACATTAACTCAATTTACTGTAGCAGCACTGACAACAGAAAACTACAATGGCGGTGGTGTTCGCTTTACAGAGAGTCAGACAGTGGTTGATATGATGCGAACACGAGAGGGTTGGATGGCTAGATagaccctttccctctctcctctggacCTCAACAAACAGCTGTCGATTAACGATGACTTTGATGAAGAATCTTCAGATCAACCTAATTAATTAGTCTTCCTTCTGATGTAATATTCACAGAAGTCACATCTCCTAATGAATTCTTCTCCGTGCTGTATGACAGGAGCAGTCTGGTGTTGTTTATATCCCACTGTATCCTGCCAGTGGGTTTATACATCTGAGCTGAGTTACATTGTGGGAACAAACTAATAGAGAATGATGTGTTTTTTTTATCATACTTTTCTTTAGTAAATAATGTGTGCATTCATGGATATTTGAACAAAACGTCTTGTAATGTTTAATTAACTCAATGcagaagtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggaagtgtgtgtgtttgtgtgtgtcctccCCTCTGAGGGACACCTGAACGCTCTGTCTGTGAACCGCTGCTGGACAGGTGAGCTCCATTTAGAAGTTGTTCcgaaccacagatctaggatcagcttagcGTACCTCAATTCTTACCTCAACCATTAGGGGGTAAAATATTAaactgatgttagatcagtgtcTGGGGGCAAATTCCTCCTACTTCGTACAACAGTGAAGGCTGGTTggaggagttataggaggactggctcattgtaatggttggaatggaattTTGGAATGGAGTGAAATGTGGTTCCAAgtatgtttgatactgttccattgataccattccagtgagcctgtcctcctatagctcctcccaccagcctccactgccgTACAGGCTCCTCAGGTACACTCCTGCTCCAGAACATACTGAACATCCAGAACatattgtaggtgtgtgtgtgtgaccgactGGGTTTGAACCTGGGTCGTCTGTGCTCCACAAGACTATGTTAGCCTGCCGAGTTAAAGCCTAAGCATTAGCTAACGCAAGTCTTCAAGTTTCAGGCATATGTTTTTTGTGGTTCACCGAACCACCTGTGTTAGTGTGGATCTGGAGAGGCTCATGGGTTATTATAATGCTGTTGAGGGCCTTCTAGAGACAAAGAGATATTACTCTGGTGTTGctgtctctatgtgtctgtcAACCTGCAGAacatacctctgtctctctctatcttggAATACACGTGGGTCTTGACCACAAAAAACACATAATGAAACCAACTACTGTATGTCCAACAGCCTTGAGTCCCCCTcatactacatactgtacattgtttTCCAACAACTTCCATAAGTCTTTAGCATTGCACAACCGCCCTGTGTAGTTGGCATGTTAGCATGTTACACAGTCTGTTGAGGTTTGCTGACAATCTGCTCTCAATGTCTGTAGGTCCATAAGAGagtatcatttatttatttctcttATCTTAGTTACTGAGACGACTGCATATATTGCTGATTTCGAAAAAATGGTAAATAAAGAGATAACATCCAGATTTACTAGGGCGCTCACATACAGGACTGCACATATATAAATATTAGTTTAGGATTATAATCGATAAATTGTCTATACACTTAAAACATTCAGAAATCCTCTGCACTTCAAAAACTGTCTCTTCGTTTTCTTCAAGTATTAGCATACCCAGATACTCTGGAGAGGTTAAATAATGTAACAAGAATACCTTGTGATGACGCTTACTTATCAAACTCCAAAATAATTCACATCATATTATTTAAGGACAATCCTTTTGATTGCTCATCTGTTAGCAGCTACATCATGGTCACAAAAACATGGAGAGAAAATGTACATTCCCAAGTCTACAGCTCTACTGTATAATAAGTAGTGATGCTGCAACAAGGCATACACTCCCCAGGGGGAGCCAGGGGCAGTGTGTCTCTCAGAGTCCTGTCTCTGCTGTTCTGTCTCTGGCTGAAGCACGTTCAGGTGTACAAAACAGTCTGGCTTTATTGAGGTTCTGCATTGAGGTCCAAATGTGTGGTAGTCTGTCTGAGAGAGGCCTCCAGGCTGAGacggtctgtctgtttgtctgtctgtctgtctgaggggtgAAGACTGAGGCACAGGCTGtggctgtctgtccgtctgtctgttctAAGGTCTCATACATGGAAGCCCTTCTCCTGTTGGTGTAGTAGCTGCAGTCGGAGGGTCTGTATGCTGCTGACGATCCTCCTCTGGTGGCCAATCAACACCACCCCGGTCCTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU323274 True 4316 lncRNA 0.41 4 63867183 63914056

Neighbor

gene id symbol gene type direction distance location
gtf2f2b LOC105016382 coding upstream 184941 63625840 ~ 63682242 (+)
serp2 NA coding upstream 341413 63519786 ~ 63525770 (+)
lacc1 lacc1 coding upstream 409612 63414756 ~ 63457571 (+)
LOC110520367 tnfsf11 coding upstream 632526 63225253 ~ 63234657 (+)
LOC110520366 akap11 coding upstream 662588 63173236 ~ 63204595 (+)
LOC110520383 LOC106586541 coding downstream 58623 63972679 ~ 63974476 (+)
LOC110520382 LOC106586539 coding downstream 466535 64380591 ~ 64382791 (+)
zgc:152951 glrx coding downstream 940684 64854740 ~ 64861974 (+)
insig2 LOC104950207 coding downstream 994590 64908646 ~ 64914396 (+)
marco marco coding downstream 1100235 65014291 ~ 65029795 (+)
G285001 NA non-coding upstream 121690 63743006 ~ 63745493 (+)
G284963 NA non-coding upstream 132774 63729710 ~ 63734409 (+)
G284986 LOC106586530 non-coding upstream 145119 63706568 ~ 63722064 (+)
G284975 NA non-coding upstream 146971 63675231 ~ 63720212 (+)
G284968 kctd4 non-coding upstream 205748 63648938 ~ 63661435 (+)
G285155 NA non-coding downstream 78077 63992133 ~ 63992935 (+)
G285172 NA non-coding downstream 115250 64029306 ~ 64070900 (+)
G285173 NA non-coding downstream 116613 64030669 ~ 64071984 (+)
G285195 NA non-coding downstream 147565 64061621 ~ 64075517 (+)
G285581 NA non-coding downstream 260674 64174730 ~ 64175088 (+)
G284599 NA other upstream 475899 63390931 ~ 63391284 (+)
G284537 NA other upstream 554789 63267119 ~ 63312394 (+)
LOC110520364 LOC106586514 other upstream 738225 63124380 ~ 63129015 (+)
G285203 NA other downstream 157376 64071432 ~ 64083982 (+)
G285763 NA other downstream 392456 64306512 ~ 64307360 (+)
G286679 NA other downstream 1195200 65109256 ~ 65109637 (+)
LOC110520396 LOC100136409 other downstream 1247335 65161342 ~ 65166580 (+)
zmym2 LOC106586592 other downstream 1346389 65260200 ~ 65311166 (+)

Expression


Co-expression Network