G285172


Basic Information

Item Value
gene id G285172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64029306 ~ 64070900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU323376
GTGAAAGTGTACCACTCATATTTCCTGAAATAAACTACTGATCTAAACgctccatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggtgtgcaaaactattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaaggactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU323376 True 574 lncRNA 0.39 2 64029306 64070900

Neighbor

gene id symbol gene type direction distance location
LOC110520383 LOC106586541 coding upstream 54830 63972679 ~ 63974476 (+)
LOC110504443 fbxo47 coding upstream 129113 63894665 ~ 63900193 (+)
LOC118944562 LOC106562846 coding upstream 140095 63888258 ~ 63889211 (+)
gtf2f2b LOC105016382 coding upstream 347064 63625840 ~ 63682242 (+)
serp2 NA coding upstream 503536 63519786 ~ 63525770 (+)
LOC110520382 LOC106586539 coding downstream 309691 64380591 ~ 64382791 (+)
zgc:152951 glrx coding downstream 783840 64854740 ~ 64861974 (+)
insig2 LOC104950207 coding downstream 837746 64908646 ~ 64914396 (+)
marco marco coding downstream 943391 65014291 ~ 65029795 (+)
steap3 LOC106586584 coding downstream 1062369 65133269 ~ 65146515 (+)
G285155 NA non-coding upstream 36371 63992133 ~ 63992935 (+)
G285077 NA non-coding upstream 115250 63867183 ~ 63914056 (+)
G285103 NA non-coding upstream 126793 63901569 ~ 63902513 (+)
G285001 NA non-coding upstream 283813 63743006 ~ 63745493 (+)
G284963 NA non-coding upstream 294897 63729710 ~ 63734409 (+)
G285581 NA non-coding downstream 103830 64174730 ~ 64175088 (+)
G285583 NA non-coding downstream 104871 64175771 ~ 64175973 (+)
G285651 NA non-coding downstream 159984 64230884 ~ 64231337 (+)
G285691 NA non-coding downstream 193654 64264554 ~ 64264764 (+)
G285717 NA non-coding downstream 208050 64278950 ~ 64279921 (+)
G284986 LOC106586530 other upstream 307242 63706568 ~ 63722064 (+)
G284599 NA other upstream 638022 63390931 ~ 63391284 (+)
G284537 NA other upstream 716912 63267119 ~ 63312394 (+)
LOC110520364 LOC106586514 other upstream 900348 63124380 ~ 63129015 (+)
G285203 NA other downstream 532 64071432 ~ 64083982 (+)
G285763 NA other downstream 235612 64306512 ~ 64307360 (+)
G286679 NA other downstream 1038356 65109256 ~ 65109637 (+)
LOC110520396 LOC100136409 other downstream 1090491 65161342 ~ 65166580 (+)
zmym2 LOC106586592 other downstream 1189545 65260200 ~ 65311166 (+)

Expression


Co-expression Network