G285717


Basic Information

Item Value
gene id G285717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64278950 ~ 64279921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU323963
ccccctatccacattgatggatcagtagtggagagggtagtaagttttaagttcctcggcatacacatcacagacaaactgaattggtccactcacacagacagcatcgtgaagaagacgcagcagcgcctcttcaacctcaggaggctgaagaaattcggcttgtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctggcgggctgtatcaccgcctggtacggcaactgctccgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggacacctacaccacccgatgttacaggaaggccataaagatcatcaaggacaacaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccaagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccaccactaacattgagtggctgctgccaacacactgactcaactccagccactttaataatgggaattgatgggaaatgatgtaaaatatatcactagccactttaaacaatgctacctaatataatgtttacataccctacattattcatctcatatgtatacgtatatactgtactctatatcatctactgcatccttatgtaattcatgtatcactagccactttaactatgccactttgtttacatactcatctcatatgtatatactgtactcgataccatctactgtatctcgcctatgctgctctgtaccatcactcattcatatatctttatgtacatattctttatccccttacactgtgtataagacagtagttttggaattgttagttagattacttgttggttattactgcattgtcggaactagaagctaaccatgtgtatgtgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU323963 True 972 lncRNA 0.44 1 64278950 64279921

Neighbor

gene id symbol gene type direction distance location
LOC110520383 LOC106586541 coding upstream 304474 63972679 ~ 63974476 (+)
LOC110504443 fbxo47 coding upstream 378757 63894665 ~ 63900193 (+)
LOC118944562 LOC106562846 coding upstream 389739 63888258 ~ 63889211 (+)
gtf2f2b LOC105016382 coding upstream 596708 63625840 ~ 63682242 (+)
serp2 NA coding upstream 753180 63519786 ~ 63525770 (+)
LOC110520382 LOC106586539 coding downstream 100670 64380591 ~ 64382791 (+)
zgc:152951 glrx coding downstream 574819 64854740 ~ 64861974 (+)
insig2 LOC104950207 coding downstream 628725 64908646 ~ 64914396 (+)
marco marco coding downstream 734370 65014291 ~ 65029795 (+)
steap3 LOC106586584 coding downstream 853348 65133269 ~ 65146515 (+)
G285691 NA non-coding upstream 14186 64264554 ~ 64264764 (+)
G285651 NA non-coding upstream 47613 64230884 ~ 64231337 (+)
G285583 NA non-coding upstream 102977 64175771 ~ 64175973 (+)
G285581 NA non-coding upstream 103862 64174730 ~ 64175088 (+)
G285195 NA non-coding upstream 203433 64061621 ~ 64075517 (+)
G285781 NA non-coding downstream 38615 64318536 ~ 64318745 (+)
G285783 NA non-coding downstream 40816 64320737 ~ 64320992 (+)
G285808 NA non-coding downstream 59275 64339196 ~ 64344064 (+)
G285811 NA non-coding downstream 65619 64345540 ~ 64345914 (+)
G285827 NA non-coding downstream 80697 64360618 ~ 64360887 (+)
G285203 NA other upstream 194968 64071432 ~ 64083982 (+)
G285001 NA other upstream 533457 63743006 ~ 63745493 (+)
G284986 LOC106586530 other upstream 556886 63706568 ~ 63722064 (+)
G284599 NA other upstream 887666 63390931 ~ 63391284 (+)
G284537 NA other upstream 966556 63267119 ~ 63312394 (+)
G285763 NA other downstream 26591 64306512 ~ 64307360 (+)
G286679 NA other downstream 829335 65109256 ~ 65109637 (+)
LOC110520396 LOC100136409 other downstream 881470 65161342 ~ 65166580 (+)
zmym2 LOC106586592 other downstream 980524 65260200 ~ 65311166 (+)
LOC118964312 LOC106586611 other downstream 1754499 66027633 ~ 66036299 (+)

Expression


Co-expression Network