Gene
RNA
| Item | Value |
|---|---|
| gene id | G285804 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 64336138 ~ 64336339 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| upstream stimulatory factor 1-like isoform X6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU324051 | True | 202 | lncRNA | 0.43 | 1 | 64336138 | 64336339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520380 | LOC106586540 | coding | downstream | 161862 | 63911999 ~ 64174276 (-) |
| LOC110505395 | LOC106586542 | coding | downstream | 431920 | 63901468 ~ 63904218 (-) |
| LOC110505387 | LOC106586543 | coding | downstream | 449637 | 63881857 ~ 63886501 (-) |
| LOC110520378 | LOC106586545 | coding | downstream | 460400 | 63867161 ~ 63875738 (-) |
| LOC110520377 | LOC106586531 | coding | downstream | 513543 | 63780997 ~ 63822595 (-) |
| LOC110520379 | NA | coding | upstream | 149450 | 64485789 ~ 64641565 (-) |
| LOC110520388 | cssa25h3orf38 | coding | upstream | 516164 | 64852503 ~ 64855851 (-) |
| LOC110520386 | LOC106586581 | coding | upstream | 525687 | 64862026 ~ 64890987 (-) |
| LOC118944694 | ccdc93 | coding | upstream | 547999 | 64884338 ~ 64895983 (-) |
| en1a | en1 | coding | upstream | 651414 | 64987753 ~ 64995840 (-) |
| G285789 | NA | non-coding | downstream | 9166 | 64326652 ~ 64326972 (-) |
| G285782 | NA | non-coding | downstream | 17010 | 64318915 ~ 64319128 (-) |
| G285758 | NA | non-coding | downstream | 32381 | 64303532 ~ 64303757 (-) |
| G285740 | NA | non-coding | downstream | 43410 | 64292351 ~ 64292728 (-) |
| G285733 | NA | non-coding | downstream | 46673 | 64289223 ~ 64289465 (-) |
| G285837 | NA | non-coding | upstream | 25133 | 64361472 ~ 64361871 (-) |
| G285842 | NA | non-coding | upstream | 32833 | 64369172 ~ 64369482 (-) |
| G285846 | NA | non-coding | upstream | 34369 | 64370708 ~ 64371440 (-) |
| G285848 | NA | non-coding | upstream | 36233 | 64372572 ~ 64372778 (-) |
| G285863 | LOC107663003 | non-coding | upstream | 46795 | 64383134 ~ 64383438 (-) |
| G284018 | NA | other | downstream | 1620961 | 62714575 ~ 62715177 (-) |
| G277749 | LOC106586429 | other | downstream | 6746955 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 6932563 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 7038376 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 8924651 | 55410143 ~ 55411487 (-) |
| G286522 | NA | other | upstream | 633210 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 677920 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 718361 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 898841 | 65235180 ~ 65235908 (-) |
| G286985 | LOC106586592 | other | upstream | 961868 | 65298207 ~ 65300417 (-) |
