G285827


Basic Information

Item Value
gene id G285827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64360618 ~ 64360887 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU324075
gtttttttcttcgcatatcttttaaaacattttgctgaacctcaacttcttctaaatactctcctgcaacccgcctcacccaacgtagctatttttcctaaagtatttatatttacttcggatctggaacccctcaactgaagctagccaactaactaccagctattcagtcagcaaaacattgctagcggtcttcagctaaccggtcatcagctaacctttagctcggaaagctctcgccagttcgaacaacgcgactctaaccagagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324075 True 270 lncRNA 0.43 1 64360618 64360887

Neighbor

gene id symbol gene type direction distance location
LOC110520383 LOC106586541 coding upstream 386142 63972679 ~ 63974476 (+)
LOC110504443 fbxo47 coding upstream 460425 63894665 ~ 63900193 (+)
LOC118944562 LOC106562846 coding upstream 471407 63888258 ~ 63889211 (+)
gtf2f2b LOC105016382 coding upstream 678376 63625840 ~ 63682242 (+)
serp2 NA coding upstream 834848 63519786 ~ 63525770 (+)
LOC110520382 LOC106586539 coding downstream 19704 64380591 ~ 64382791 (+)
zgc:152951 glrx coding downstream 493853 64854740 ~ 64861974 (+)
insig2 LOC104950207 coding downstream 547759 64908646 ~ 64914396 (+)
marco marco coding downstream 653404 65014291 ~ 65029795 (+)
steap3 LOC106586584 coding downstream 772382 65133269 ~ 65146515 (+)
G285811 NA non-coding upstream 14704 64345540 ~ 64345914 (+)
G285808 NA non-coding upstream 16554 64339196 ~ 64344064 (+)
G285783 NA non-coding upstream 39626 64320737 ~ 64320992 (+)
G285781 NA non-coding upstream 41873 64318536 ~ 64318745 (+)
G285717 NA non-coding upstream 80697 64278950 ~ 64279921 (+)
G285818 NA non-coding downstream 2323 64363210 ~ 64363487 (+)
G285838 NA non-coding downstream 3487 64364374 ~ 64364641 (+)
G285862 NA non-coding downstream 22173 64383060 ~ 64383415 (+)
G285865 NA non-coding downstream 23327 64384214 ~ 64384553 (+)
G285866 NA non-coding downstream 23916 64384803 ~ 64385072 (+)
G285763 NA other upstream 53258 64306512 ~ 64307360 (+)
G285203 NA other upstream 276636 64071432 ~ 64083982 (+)
G285001 NA other upstream 615125 63743006 ~ 63745493 (+)
G284986 LOC106586530 other upstream 638554 63706568 ~ 63722064 (+)
G284599 NA other upstream 969334 63390931 ~ 63391284 (+)
G286679 NA other downstream 748369 65109256 ~ 65109637 (+)
LOC110520396 LOC100136409 other downstream 800504 65161342 ~ 65166580 (+)
zmym2 LOC106586592 other downstream 899558 65260200 ~ 65311166 (+)
LOC118964312 LOC106586611 other downstream 1673533 66027633 ~ 66036299 (+)
G288252 NA other downstream 2188935 66549822 ~ 66550487 (+)

Expression


Co-expression Network