G285905 (LOC106585892)


Basic Information

Item Value
gene id G285905
gene name LOC106585892
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64438256 ~ 64438605 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU324155
atatatatctgtttattatacctgttgatacagggctcatatgtgaaactattctaactgaacctTTTCTTTCACattgacactgactccgaatgggagcccccagtgccaaggtgtccatcccccactgaagctggttcatccagctcctgccacaagtggtgttcatctgcccaaatttatttctgcaggcatggatgtgcctcagggccaaaagggcacagcatggaggcgtcgctgtgttctttgcaaaatgaagtcccccatcacctgcaccacatgcttggttaccctctgctttacagcagaaagagactgttatggcacctggcatcagcagcacaatattg

Function

NR:

description
piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324155 True 350 lncRNA 0.48 1 64438256 64438605

Neighbor

gene id symbol gene type direction distance location
LOC110520382 LOC106586539 coding upstream 55465 64380591 ~ 64382791 (+)
LOC110520383 LOC106586541 coding upstream 463780 63972679 ~ 63974476 (+)
LOC110504443 fbxo47 coding upstream 538063 63894665 ~ 63900193 (+)
LOC118944562 LOC106562846 coding upstream 549045 63888258 ~ 63889211 (+)
gtf2f2b LOC105016382 coding upstream 756014 63625840 ~ 63682242 (+)
zgc:152951 glrx coding downstream 416135 64854740 ~ 64861974 (+)
insig2 LOC104950207 coding downstream 470041 64908646 ~ 64914396 (+)
marco marco coding downstream 575686 65014291 ~ 65029795 (+)
steap3 LOC106586584 coding downstream 694664 65133269 ~ 65146515 (+)
LOC110520396 LOC100136409 coding downstream 722737 65161342 ~ 65166580 (+)
G285903 NA non-coding upstream 2774 64435274 ~ 64435482 (+)
G285866 NA non-coding upstream 53184 64384803 ~ 64385072 (+)
G285865 NA non-coding upstream 53703 64384214 ~ 64384553 (+)
G285862 NA non-coding upstream 54841 64383060 ~ 64383415 (+)
G285838 NA non-coding upstream 73615 64364374 ~ 64364641 (+)
G285907 NA non-coding downstream 1082 64439687 ~ 64439886 (+)
G285912 NA non-coding downstream 7715 64446320 ~ 64446648 (+)
G285920 NA non-coding downstream 19965 64458570 ~ 64458815 (+)
G285932 NA non-coding downstream 45214 64483819 ~ 64484195 (+)
G285936 NA non-coding downstream 52763 64491368 ~ 64491633 (+)
G285763 NA other upstream 130896 64306512 ~ 64307360 (+)
G285203 NA other upstream 354274 64071432 ~ 64083982 (+)
G285001 NA other upstream 692763 63743006 ~ 63745493 (+)
G284986 LOC106586530 other upstream 716192 63706568 ~ 63722064 (+)
G284599 NA other upstream 1046972 63390931 ~ 63391284 (+)
G286679 NA other downstream 670651 65109256 ~ 65109637 (+)
zmym2 LOC106586592 other downstream 821840 65260200 ~ 65311166 (+)
LOC118964312 LOC106586611 other downstream 1595815 66027633 ~ 66036299 (+)
G288252 NA other downstream 2111217 66549822 ~ 66550487 (+)

Expression


Co-expression Network