G285943 (LOC106586535)


Basic Information

Item Value
gene id G285943
gene name LOC106586535
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64502505 ~ 64503428 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU324194
TGTTGGCTGTGATCTTCAGGCTCCCAGGGTTGCGAATGAGTTTATCCAGGATGCTGACGATCTGTTCGAACTTGGGTCTGTTGTTCCTCTCCTTCTGCCAGCAGTCCAACATCAGCTGGTACAGAGTAGCAGGACAGTCCATAGGAGGAGGCAGTCTGTAGCCCTCATCTACTGCTTTGATAACGTCCTGATTGGACATCTCCCAGTAAGGCCGCTCCCCGTATGACATCACTTCCCAGAGCACGATGCCGTAGCTCCAGGCGTCGCTGGCCGAGGTGAACTTCCTGTAGGAGATAGCTTCTGGAGCTGTCCACCTGATAGGGATCTTACctccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324194 True 335 lncRNA 0.54 2 64502505 64503428

Neighbor

gene id symbol gene type direction distance location
LOC110520382 LOC106586539 coding upstream 119714 64380591 ~ 64382791 (+)
LOC110520383 LOC106586541 coding upstream 528029 63972679 ~ 63974476 (+)
LOC110504443 fbxo47 coding upstream 602312 63894665 ~ 63900193 (+)
LOC118944562 LOC106562846 coding upstream 613294 63888258 ~ 63889211 (+)
gtf2f2b LOC105016382 coding upstream 820263 63625840 ~ 63682242 (+)
zgc:152951 glrx coding downstream 351312 64854740 ~ 64861974 (+)
insig2 LOC104950207 coding downstream 405218 64908646 ~ 64914396 (+)
marco marco coding downstream 510863 65014291 ~ 65029795 (+)
steap3 LOC106586584 coding downstream 629841 65133269 ~ 65146515 (+)
LOC110520396 LOC100136409 coding downstream 657914 65161342 ~ 65166580 (+)
G285936 NA non-coding upstream 10872 64491368 ~ 64491633 (+)
G285932 NA non-coding upstream 18310 64483819 ~ 64484195 (+)
G285920 NA non-coding upstream 43690 64458570 ~ 64458815 (+)
G285912 NA non-coding upstream 55857 64446320 ~ 64446648 (+)
G285907 NA non-coding upstream 62619 64439687 ~ 64439886 (+)
G285954 NA non-coding downstream 21531 64524959 ~ 64525243 (+)
G285968 LOC106586578 non-coding downstream 46099 64549527 ~ 64549951 (+)
G285969 NA non-coding downstream 47876 64551304 ~ 64551518 (+)
G285977 NA non-coding downstream 78651 64582079 ~ 64582302 (+)
G285995 NA non-coding downstream 115134 64618562 ~ 64619742 (+)
G285763 NA other upstream 195145 64306512 ~ 64307360 (+)
G285203 NA other upstream 418523 64071432 ~ 64083982 (+)
G285001 NA other upstream 757012 63743006 ~ 63745493 (+)
G284986 LOC106586530 other upstream 780441 63706568 ~ 63722064 (+)
G284599 NA other upstream 1111221 63390931 ~ 63391284 (+)
G286679 NA other downstream 605828 65109256 ~ 65109637 (+)
zmym2 LOC106586592 other downstream 757017 65260200 ~ 65311166 (+)
LOC118964312 LOC106586611 other downstream 1530992 66027633 ~ 66036299 (+)
G288252 NA other downstream 2046394 66549822 ~ 66550487 (+)

Expression


Co-expression Network