G286426


Basic Information

Item Value
gene id G286426
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64783433 ~ 64784851 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU324708
atcatgagtagaCTAGTTATAGTTGGCTAGGTAACCAATACCTCATGAGTAGACTAGTTATAGTTGGCTAGGTaaccaatacatcatgagtagactagttatagttggctaggtaaccaatacatcatgagtagaCTAGCTATAGTTGGCTAGGTAACCAATACATAATGAGTTAGACTAGCTATAGTTGGCTAGGTAACCAA
>TU324710
ATCATGAGTAGCCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtagcCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtagcCCAGCTGTAGTTGGCTAGGTaaccaatacatcatgagtagactagctatagttggctagGTaaccaatacatcatgagtaTGATTACCTAGCCAGCTGTAGTTGGCTAGGCAACCAATACATAATGAGTAGACTAGCTATAGTTGGCTAGGTAACCAATACATAATGAGTAGACTAGCTATAGTTGGCTAGGTAAACCAATACATAATGAGTAGACTAGCTATAGTTGGCTAGGTAACCAATACATAATGAGTTAGACTAGCTATAGTTGGCTAGGTAACCAA
>TU324709
GCCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtaTGATTACCTAGCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtaTGATTACCTAGCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtaTGATTACCTAGCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtaTGATTACCTAGCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtaTGATTACCTAGCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtagcCCAGCTGTAGTTGACTAGGTaaccaatacatcatgagtaTGATTACCTAGCCAGCTGTAGTTGACTAGGTaaccaatacatcatgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324708 False 203 lncRNA 0.37 2 64783433 64783809
TU324710 False 377 lncRNA 0.40 3 64783433 64784851
TU324709 True 380 lncRNA 0.41 3 64784007 64784709

Neighbor

gene id symbol gene type direction distance location
LOC110520379 NA coding downstream 141868 64485789 ~ 64641565 (-)
LOC110520380 LOC106586540 coding downstream 609157 63911999 ~ 64174276 (-)
LOC110505395 LOC106586542 coding downstream 879215 63901468 ~ 63904218 (-)
LOC110505387 LOC106586543 coding downstream 896932 63881857 ~ 63886501 (-)
LOC110520378 LOC106586545 coding downstream 907695 63867161 ~ 63875738 (-)
LOC110520388 cssa25h3orf38 coding upstream 67652 64852503 ~ 64855851 (-)
LOC110520386 LOC106586581 coding upstream 77175 64862026 ~ 64890987 (-)
LOC118944694 ccdc93 coding upstream 99487 64884338 ~ 64895983 (-)
en1a en1 coding upstream 202902 64987753 ~ 64995840 (-)
c1ql2 LOC106586564 coding upstream 321878 65106729 ~ 65108799 (-)
G286299 NA non-coding downstream 5496 64777664 ~ 64777937 (-)
G286292 NA non-coding downstream 13407 64769797 ~ 64770026 (-)
G286253 NA non-coding downstream 46224 64736919 ~ 64737209 (-)
G286247 NA non-coding downstream 51547 64731677 ~ 64731886 (-)
G286238 NA non-coding downstream 64667 64718410 ~ 64718766 (-)
G286463 NA non-coding upstream 106254 64891105 ~ 64928286 (-)
G286520 NA non-coding upstream 184384 64969235 ~ 64969459 (-)
G286523 NA non-coding upstream 186407 64971258 ~ 64971597 (-)
G286536 NA non-coding upstream 193395 64978246 ~ 64978524 (-)
G284018 NA other downstream 2068256 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 7194250 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 7379858 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 7485671 57270782 ~ 57297762 (-)
G275250 NA other downstream 9371946 55410143 ~ 55411487 (-)
G286522 NA other upstream 184698 64969549 ~ 64970755 (-)
G286580 marco other upstream 229408 65014259 ~ 65029736 (-)
G286638 NA other upstream 269849 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 450329 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 513356 65298207 ~ 65300417 (-)

Expression


Co-expression Network