G286739


Basic Information

Item Value
gene id G286739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65232222 ~ 65232614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU325086
cagggacatggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagaactgagactgggatggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatagccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcattgagctcgagctgttttgcaaggaggaatgggaaaaaatgtcaaatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaa

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU325086 True 393 lncRNA 0.41 1 65232222 65232614

Neighbor

gene id symbol gene type direction distance location
LOC118964311 LOC106586591 coding upstream 877 65217057 ~ 65231345 (+)
LOC110520399 LOC106586589 coding upstream 19408 65192057 ~ 65212814 (+)
tmem37 tmem37 coding upstream 57886 65170904 ~ 65176413 (+)
LOC110520396 LOC100136409 coding upstream 65642 65161342 ~ 65166580 (+)
steap3 LOC106586584 coding upstream 85707 65133269 ~ 65146515 (+)
LOC110520400 NA coding downstream 8676 65241290 ~ 65242647 (+)
zmym2 LOC106586592 coding downstream 27586 65260200 ~ 65311166 (+)
ift88 ift88 coding downstream 130122 65362736 ~ 65386706 (+)
LOC110520411 NA coding downstream 256592 65489157 ~ 65491432 (+)
popdc2 popdc2 coding downstream 259345 65491959 ~ 65503791 (+)
G286734 NA non-coding upstream 371 65231470 ~ 65231851 (+)
G286772 NA non-coding upstream 16397 65215426 ~ 65215825 (+)
G286769 NA non-coding upstream 44968 65186980 ~ 65187254 (+)
G286765 NA non-coding upstream 50123 65181882 ~ 65182099 (+)
G286775 LOC107756720 non-coding downstream 2200 65234814 ~ 65235740 (+)
G286777 NA non-coding downstream 18469 65251083 ~ 65251369 (+)
G286790 NA non-coding downstream 58852 65291466 ~ 65334118 (+)
G286791 NA non-coding downstream 68274 65300888 ~ 65301795 (+)
G286726 LOC106582068 non-coding downstream 161762 65394376 ~ 65394785 (+)
G286679 NA other upstream 122585 65109256 ~ 65109637 (+)
G285763 NA other upstream 924862 64306512 ~ 64307360 (+)
G285203 NA other upstream 1148240 64071432 ~ 64083982 (+)
G285001 NA other upstream 1486729 63743006 ~ 63745493 (+)
LOC118964312 LOC106586611 other downstream 801806 66027633 ~ 66036299 (+)
G288252 NA other downstream 1317208 66549822 ~ 66550487 (+)
G288430 NA other downstream 1498672 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 1550759 66783373 ~ 66787442 (+)

Expression


Co-expression Network