G286927


Basic Information

Item Value
gene id G286927
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65239068 ~ 65240985 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU325303
TGTAACAACAGACCCTATACAAGTCAGCCTTAATGTTGAACTTAAACAGCTGTTGTGAAATCAATATGGTTAAGACAGTAGTGAATAAATATTAATATAAAATGTGTAAATGTTAATATTAGACAAGCAATAAAACAATTACGTGGAACGCTAGAGCCTTATGATCTACATATTTAGCAGGAAAGACAGGTACAATAGGAATAGGTTTTGTGTGATTATCTGAAACTAATTCCACACGTAGAACAAAGGAACCAATTCCAATTGGCAAAATCACATTTACAATAGCAACTTTTGGTCAAGGACGTGGATTGGAGAACCAAAAGCGTCCTGAAATTGTATGGGAAGTCAACCAACATTATAGTAAAAGTTACTATTGACCATAAATGATTGTGGGGCGATAGCCTCCACAATATAGTATGCATCGATTGAGGGTGTGTTCGTAATTtacgatttcagagcactctcccttgagtgtgccagagcgcacaATAACCCACGATTTTTTCATTGTTACAACTGTTGAATAACTGATGAACTTACGAACACGCAACACCCGTCGAATTTGACAGTTGTCAGTAAAGGTGGGCAAAAAACTGAATTAAATTGTTGCTAGCAACACAGTTACAGTCACTAACGCTCTAGATAactagctctgctagggtgagttaAATGGTCAGTGAGTTcgctcatttgtgtctggaagtagctagcaagctaaccaaCTTTAGCAAGCTAACCAACTGCCGTTGTGAGACAGCTCTCACGTGCTCATTTCTTTACAATAACTACCAGCAAACGATGTGCTACCGTTTTTGTAGCATCTGTACAAATTCTAACACCAGATCGGTTGTCATAAGAAATGTATGCAAACAAATCTAGGCTACTGtagatagatagctagctatatgttGGTATTCAAGCTGTTAATCAATAAATGCaaagtcacttgttaaatccacttcaaccagtgtagaggaaggggaggagaccagttaaaatgatttttaagcctggagacaattgGAGACATGGATtatgcatgtgtgccattcagagggtgaatgggcaagacaaaggatttgtgcctttgaacagagtatggtagtaggtgccaggcgcaccgttttaagtgtttcaagaactgcaaggctgtgtttgctattttgcaccccagtatctctacttgcacatcatcatctgcacatcaatcactccagtgttaatgctaaattgaaatgatttcgccactatggcctatttattgccttacctccctaattttactacatttgcacacactgtatatagtttttctattgtgttattgactgtacatttgtttatcccatgtgtaactctgttgttgtttttgtcgcactgcctcgctttatcttggccaggtcgcagttgtaaattagaaattgttctcaactggccttaaataaaggtgaaatatatcttc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325303 True 1462 lncRNA 0.39 2 65239068 65240985

Neighbor

gene id symbol gene type direction distance location
LOC110520397 sctr coding downstream 56414 65173958 ~ 65182654 (-)
c3h2orf76 cssa25h2orf76 coding downstream 88897 65146520 ~ 65150171 (-)
c1ql2 LOC106586564 coding downstream 130269 65106729 ~ 65108799 (-)
en1a en1 coding downstream 246915 64987753 ~ 64995840 (-)
LOC118944694 ccdc93 coding downstream 343085 64884338 ~ 64895983 (-)
LOC110520402 gja3 coding upstream 79909 65320894 ~ 65326014 (-)
gjb8 cxb6 coding upstream 85177 65326162 ~ 65330529 (-)
cryl1 NA coding upstream 89847 65330832 ~ 65362601 (-)
eef1akmt1 eef1akmt1 coding upstream 146538 65387523 ~ 65390331 (-)
xpo4 xpo4 coding upstream 151864 65392849 ~ 65432153 (-)
G286952 NA non-coding downstream 6408 65232046 ~ 65232660 (-)
G286951 NA non-coding downstream 7205 65231434 ~ 65231863 (-)
G286929 NA non-coding downstream 47562 65190969 ~ 65191506 (-)
G286925 NA non-coding downstream 52552 65186271 ~ 65186516 (-)
G286954 NA non-coding upstream 3731 65244716 ~ 65244984 (-)
G286959 NA non-coding upstream 9246 65250231 ~ 65250498 (-)
G286960 NA non-coding upstream 10658 65251643 ~ 65251849 (-)
G286961 NA non-coding upstream 11004 65251989 ~ 65252788 (-)
G286979 NA non-coding upstream 49747 65290732 ~ 65304498 (-)
G286953 LOC107579696 other downstream 3160 65235180 ~ 65235908 (-)
G286638 NA other downstream 163083 65054700 ~ 65075985 (-)
G286580 marco other downstream 209332 65014259 ~ 65029736 (-)
G286522 NA other downstream 268313 64969549 ~ 64970755 (-)
G284018 NA other downstream 2523891 62714575 ~ 62715177 (-)
G286985 LOC106586592 other upstream 57222 65298207 ~ 65300417 (-)
G287042 NA other upstream 205840 65446825 ~ 65447283 (-)
G287112 NA other upstream 338806 65579791 ~ 65580495 (-)
G288578 NA other upstream 1601686 66842671 ~ 66842881 (-)
G289678 NA other upstream 2385847 67626832 ~ 67633493 (-)

Expression


Co-expression Network