G286726 (LOC106582068)


Basic Information

Item Value
gene id G286726
gene name LOC106582068
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65394376 ~ 65394785 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU325073
cttgagcAGGTCCTGAGACATGAGTGGCAGAATGATGTTGACCCCAAACAGAACTACGTCTGCAGCCGACACCGACCGACCTGTCGCTCCCGAACCCTGCTCCTGCCCCCGGAACACCTCATCTATTCCAACACCTGTGTCTGAGAAGTCAATGAACTCCTTAGAGAGCAGGTTGGTGAGCAGCTCCATGATGAGCAGCAGGTCCTGGTACTGGTCCTCCTCAGCAGCCACATCAGCCCTCTTCCTGCCCAGGTTGTTCTTAGAGTAGACCTGCAGCAGAGTCAGGCACACCTCGTACAGCTTCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325073 True 306 lncRNA 0.56 2 65394376 65394785

Neighbor

gene id symbol gene type direction distance location
ift88 ift88 coding upstream 7670 65362736 ~ 65386706 (+)
zmym2 LOC106586592 coding upstream 83210 65260200 ~ 65311166 (+)
LOC110520400 NA coding upstream 151729 65241290 ~ 65242647 (+)
LOC118964311 LOC106586591 coding upstream 163031 65217057 ~ 65231345 (+)
LOC110520399 LOC106586589 coding upstream 181562 65192057 ~ 65212814 (+)
LOC110520411 NA coding downstream 94421 65489157 ~ 65491432 (+)
popdc2 popdc2 coding downstream 97174 65491959 ~ 65503791 (+)
wars2 wars2 coding downstream 188250 65583035 ~ 65599863 (+)
LOC110520416 tbx15 coding downstream 219400 65614185 ~ 65637086 (+)
LOC110520417 gdap2 coding downstream 382411 65777196 ~ 65813495 (+)
G286790 NA non-coding upstream 60258 65291466 ~ 65334118 (+)
G286791 NA non-coding upstream 92581 65300888 ~ 65301795 (+)
G286777 NA non-coding upstream 143007 65251083 ~ 65251369 (+)
G286775 LOC107756720 non-coding upstream 158636 65234814 ~ 65235740 (+)
G286739 NA non-coding upstream 161762 65232222 ~ 65232614 (+)
G286824 xpo4 non-coding downstream 12951 65407736 ~ 65410917 (+)
G286843 NA non-coding downstream 49527 65444312 ~ 65444554 (+)
G286849 LOC106586596 non-coding downstream 58920 65453705 ~ 65454341 (+)
G286855 NA non-coding downstream 66211 65460996 ~ 65554174 (+)
G286869 LOC106586566 non-coding downstream 86496 65481281 ~ 65482260 (+)
LOC110520396 LOC100136409 other upstream 227796 65161342 ~ 65166580 (+)
G286679 NA other upstream 284739 65109256 ~ 65109637 (+)
G285763 NA other upstream 1087016 64306512 ~ 64307360 (+)
G285203 NA other upstream 1310394 64071432 ~ 64083982 (+)
LOC118964312 LOC106586611 other downstream 639635 66027633 ~ 66036299 (+)
G288252 NA other downstream 1155037 66549822 ~ 66550487 (+)
G288430 NA other downstream 1336501 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 1388588 66783373 ~ 66787442 (+)
G288674 NA other downstream 1598386 66993171 ~ 66994131 (+)

Expression


Co-expression Network