G286875 (LOC106582073)


Basic Information

Item Value
gene id G286875
gene name LOC106582073
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65507678 ~ 65508356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU325240
CTGTATCCATGGACAATTATCTTGGTGGGTTGGGAGGAGTTGAAGTAGGTGTTGTTGCTGAGGAAGTCCTGACCGAAGAGGCTGGCACAGTCTGTATTCTTGCGTGTCAAGAGCAGGTACTGCACCTGTAGCTTGCTGCCCTGCTGATGGTACTCCAGCCAGGTCGTGTTGTTGAAGTCAGCACATTCTGATCTGGGCTCCTCATCTTCCCCTGCAGATAGGTTGGTGAAATGTGTTGGTGAACTGTGCCTCGGATCCTTAGCTTTGGAAACTTTATTTTCCCTCTCAGCAGTCCTTGTAGCTATGCAATAATTCACTTTGGTTCTAGAAATGTCATTCAACCCTCTACTGGTCAACAGTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325240 True 363 lncRNA 0.48 2 65507678 65508356

Neighbor

gene id symbol gene type direction distance location
popdc2 popdc2 coding upstream 3887 65491959 ~ 65503791 (+)
LOC110520411 NA coding upstream 16611 65489157 ~ 65491432 (+)
ift88 ift88 coding upstream 120972 65362736 ~ 65386706 (+)
zmym2 LOC106586592 coding upstream 196512 65260200 ~ 65311166 (+)
LOC110520400 NA coding upstream 265031 65241290 ~ 65242647 (+)
wars2 wars2 coding downstream 74679 65583035 ~ 65599863 (+)
LOC110520416 tbx15 coding downstream 105829 65614185 ~ 65637086 (+)
LOC110520417 gdap2 coding downstream 268840 65777196 ~ 65813495 (+)
LOC118964312 LOC106586611 coding downstream 519277 66027633 ~ 66036299 (+)
LOC110504495 LOC106586612 coding downstream 599511 66107867 ~ 66161419 (+)
G286869 LOC106586566 non-coding upstream 25418 65481281 ~ 65482260 (+)
G286849 LOC106586596 non-coding upstream 53337 65453705 ~ 65454341 (+)
G286843 NA non-coding upstream 63124 65444312 ~ 65444554 (+)
G286824 xpo4 non-coding upstream 96761 65407736 ~ 65410917 (+)
G286882 LOC106586600 non-coding downstream 2251 65510607 ~ 65512345 (+)
G286879 NA non-coding downstream 25246 65533602 ~ 65534662 (+)
G287085 NA non-coding downstream 49722 65558078 ~ 65558292 (+)
G287093 NA non-coding downstream 56313 65564669 ~ 65564900 (+)
G287095 NA non-coding downstream 59119 65567475 ~ 65567775 (+)
LOC110520396 LOC100136409 other upstream 341098 65161342 ~ 65166580 (+)
G286679 NA other upstream 398041 65109256 ~ 65109637 (+)
G285763 NA other upstream 1200318 64306512 ~ 64307360 (+)
G285203 NA other upstream 1423696 64071432 ~ 64083982 (+)
G288252 NA other downstream 1041466 66549822 ~ 66550487 (+)
G288430 NA other downstream 1222930 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 1275017 66783373 ~ 66787442 (+)
G288674 NA other downstream 1484815 66993171 ~ 66994131 (+)

Expression


Co-expression Network