G287085


Basic Information

Item Value
gene id G287085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65558078 ~ 65558292 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU325496
ATGCATattgttgattttattaaaacacatagggtgtgtctatatatggaaaaatacacatttaaaaaatTTGACCaattgattggttgaaagaacagaCAACTTTCTGTTGaccaatatatttttttagttGAGGACAGCCCTAAcgcaaacacatttttttttttattgtgactcGATATCAGTGAGAGTCAAACAAATAAtattctgttctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325496 True 215 lncRNA 0.29 1 65558078 65558292

Neighbor

gene id symbol gene type direction distance location
popdc2 popdc2 coding upstream 54287 65491959 ~ 65503791 (+)
LOC110520411 NA coding upstream 67011 65489157 ~ 65491432 (+)
ift88 ift88 coding upstream 171372 65362736 ~ 65386706 (+)
zmym2 LOC106586592 coding upstream 246912 65260200 ~ 65311166 (+)
LOC110520400 NA coding upstream 315431 65241290 ~ 65242647 (+)
wars2 wars2 coding downstream 24743 65583035 ~ 65599863 (+)
LOC110520416 tbx15 coding downstream 55893 65614185 ~ 65637086 (+)
LOC110520417 gdap2 coding downstream 218904 65777196 ~ 65813495 (+)
LOC118964312 LOC106586611 coding downstream 469341 66027633 ~ 66036299 (+)
LOC110504495 LOC106586612 coding downstream 549575 66107867 ~ 66161419 (+)
G286855 NA non-coding upstream 3904 65460996 ~ 65554174 (+)
G286879 NA non-coding upstream 23416 65533602 ~ 65534662 (+)
G286882 LOC106586600 non-coding upstream 45733 65510607 ~ 65512345 (+)
G286875 LOC106582073 non-coding upstream 49722 65507678 ~ 65508356 (+)
G287093 NA non-coding downstream 6377 65564669 ~ 65564900 (+)
G287095 NA non-coding downstream 9183 65567475 ~ 65567775 (+)
G287133 NA non-coding downstream 52726 65611018 ~ 65611305 (+)
G287215 NA non-coding downstream 117816 65676108 ~ 65676375 (+)
LOC110520396 LOC100136409 other upstream 391498 65161342 ~ 65166580 (+)
G286679 NA other upstream 448441 65109256 ~ 65109637 (+)
G285763 NA other upstream 1250718 64306512 ~ 64307360 (+)
G285203 NA other upstream 1474096 64071432 ~ 64083982 (+)
G288252 NA other downstream 991530 66549822 ~ 66550487 (+)
G288430 NA other downstream 1172994 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 1225081 66783373 ~ 66787442 (+)
G288674 NA other downstream 1434879 66993171 ~ 66994131 (+)

Expression


Co-expression Network