G287093


Basic Information

Item Value
gene id G287093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65564669 ~ 65564900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU325504
CttacttgaccatgctgtaggtcatgtaactgtttgttacctgcaatatgttttgtggactttTGTGgaccggacagatgttgctctaatgaaacaaaggtgtggttgaattcaTTCTGCAACTGtgttattgtctcggccttagacctatatatcacggtgtcaaagcatatgaactaacaggttatagagtaAACAACGCaaatatcacaacacataggttgtaatatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325504 True 232 lncRNA 0.39 1 65564669 65564900

Neighbor

gene id symbol gene type direction distance location
popdc2 popdc2 coding upstream 60878 65491959 ~ 65503791 (+)
LOC110520411 NA coding upstream 73602 65489157 ~ 65491432 (+)
ift88 ift88 coding upstream 177963 65362736 ~ 65386706 (+)
zmym2 LOC106586592 coding upstream 253503 65260200 ~ 65311166 (+)
LOC110520400 NA coding upstream 322022 65241290 ~ 65242647 (+)
wars2 wars2 coding downstream 18135 65583035 ~ 65599863 (+)
LOC110520416 tbx15 coding downstream 49285 65614185 ~ 65637086 (+)
LOC110520417 gdap2 coding downstream 212296 65777196 ~ 65813495 (+)
LOC118964312 LOC106586611 coding downstream 462733 66027633 ~ 66036299 (+)
LOC110504495 LOC106586612 coding downstream 542967 66107867 ~ 66161419 (+)
G287085 NA non-coding upstream 6377 65558078 ~ 65558292 (+)
G286855 NA non-coding upstream 10495 65460996 ~ 65554174 (+)
G286879 NA non-coding upstream 30007 65533602 ~ 65534662 (+)
G286882 LOC106586600 non-coding upstream 52324 65510607 ~ 65512345 (+)
G286875 LOC106582073 non-coding upstream 56313 65507678 ~ 65508356 (+)
G287095 NA non-coding downstream 2575 65567475 ~ 65567775 (+)
G287133 NA non-coding downstream 46118 65611018 ~ 65611305 (+)
G287215 NA non-coding downstream 111208 65676108 ~ 65676375 (+)
G287281 NA non-coding downstream 160997 65725897 ~ 65726577 (+)
LOC110520396 LOC100136409 other upstream 398089 65161342 ~ 65166580 (+)
G286679 NA other upstream 455032 65109256 ~ 65109637 (+)
G285763 NA other upstream 1257309 64306512 ~ 64307360 (+)
G285203 NA other upstream 1480687 64071432 ~ 64083982 (+)
G288252 NA other downstream 984922 66549822 ~ 66550487 (+)
G288430 NA other downstream 1166386 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 1218473 66783373 ~ 66787442 (+)
G288674 NA other downstream 1428271 66993171 ~ 66994131 (+)

Expression


Co-expression Network