G287110



Basic Information


Item Value
gene id G287110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65579272 ~ 65579563 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU325521
gatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatttacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU325521 True 292 lncRNA 0.43 1 65579272 65579563

Neighbor


gene id symbol gene type direction distance location
LOC110520413 LOC106586602 coding downstream 29857 65535814 ~ 65549415 (-)
trnaa-ugc-4 NA coding downstream 36164 65543034 ~ 65543108 (-)
LOC110520412 LOC106586598 coding downstream 43992 65520214 ~ 65535280 (-)
hsd3b1 LOC106586600 coding downstream 66927 65510598 ~ 65512345 (-)
pla1a pla1a coding downstream 70888 65503985 ~ 65508384 (-)
LOC110504464 NA coding upstream 117015 65696578 ~ 65697411 (-)
LOC110505400 NA coding upstream 130041 65709604 ~ 65710566 (-)
LOC110504474 wdr3 coding upstream 189751 65769314 ~ 65777312 (-)
LOC110520418 fam46c coding upstream 241892 65821455 ~ 65840478 (-)
LOC110520419 man1a2 coding upstream 274158 65853721 ~ 65963713 (-)
G287097 NA non-coding downstream 11024 65568020 ~ 65568248 (-)
G287083 NA non-coding downstream 22614 65556427 ~ 65556658 (-)
G287081 NA non-coding downstream 24541 65554530 ~ 65554731 (-)
G287067 NA non-coding downstream 46821 65526948 ~ 65532451 (-)
G287043 NA non-coding downstream 130855 65448068 ~ 65448417 (-)
G287206 NA non-coding upstream 79090 65658653 ~ 65658911 (-)
G287207 NA non-coding upstream 80644 65660207 ~ 65660428 (-)
G287287 NA non-coding upstream 152228 65731791 ~ 65732036 (-)
G287308 NA non-coding upstream 176267 65755830 ~ 65756032 (-)
G287311 NA non-coding upstream 178030 65757593 ~ 65757817 (-)
G287042 NA other downstream 131989 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 278855 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 343364 65235180 ~ 65235908 (-)
G286638 NA other downstream 503287 65054700 ~ 65075985 (-)
G286580 marco other downstream 549536 65014259 ~ 65029736 (-)
G287112 NA other upstream 228 65579791 ~ 65580495 (-)
G288578 NA other upstream 1263108 66842671 ~ 66842881 (-)
G289678 NA other upstream 2047269 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 2304189 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 2627027 68206330 ~ 68208674 (-)

Expression



Co-expression Network