G287287



Basic Information


Item Value
gene id G287287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65731791 ~ 65732036 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU325715
gtacatcactggggccaggtttcctgccatccaggacctctataccctggcggtgtcagaggaagaccctaaagattgccaaagactccagcctcccTAGTCATAGGCTGTTtcctctgctaccacatggcaagcggcaccggtctaggtccaaaaggctttttaacagcttctGAATAGCTAATctaatggctacctggactatctgcattgaccccctcctccc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU325715 True 226 lncRNA 0.53 2 65731791 65732036

Neighbor


gene id symbol gene type direction distance location
LOC110505400 NA coding downstream 21225 65709604 ~ 65710566 (-)
LOC110504464 NA coding downstream 34380 65696578 ~ 65697411 (-)
LOC110520413 LOC106586602 coding downstream 182376 65535814 ~ 65549415 (-)
trnaa-ugc-4 NA coding downstream 188683 65543034 ~ 65543108 (-)
LOC110520412 LOC106586598 coding downstream 196511 65520214 ~ 65535280 (-)
LOC110504474 wdr3 coding upstream 37278 65769314 ~ 65777312 (-)
LOC110520418 fam46c coding upstream 89419 65821455 ~ 65840478 (-)
LOC110520419 man1a2 coding upstream 121685 65853721 ~ 65963713 (-)
LOC110520420 trim45 coding upstream 241444 65973480 ~ 65978709 (-)
LOC110520422 vtcn1 coding upstream 246789 65978825 ~ 65984444 (-)
G287207 NA non-coding downstream 71363 65660207 ~ 65660428 (-)
G287206 NA non-coding downstream 72880 65658653 ~ 65658911 (-)
G287110 NA non-coding downstream 152228 65579272 ~ 65579563 (-)
G287097 NA non-coding downstream 163543 65568020 ~ 65568248 (-)
G287083 NA non-coding downstream 175133 65556427 ~ 65556658 (-)
G287308 NA non-coding upstream 23794 65755830 ~ 65756032 (-)
G287311 NA non-coding upstream 25557 65757593 ~ 65757817 (-)
G287331 NA non-coding upstream 35959 65767995 ~ 65768205 (-)
G287552 NA non-coding upstream 44529 65776565 ~ 65776792 (-)
G287112 NA other downstream 151296 65579791 ~ 65580495 (-)
G287042 NA other downstream 284508 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 431374 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 495883 65235180 ~ 65235908 (-)
G286638 NA other downstream 655806 65054700 ~ 65075985 (-)
G288578 NA other upstream 1110635 66842671 ~ 66842881 (-)
G289678 NA other upstream 1894796 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 2151716 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 2474554 68206330 ~ 68208674 (-)
G290542 NA other upstream 2847067 68579103 ~ 68580707 (-)

Expression



Co-expression Network