G287334


Basic Information

Item Value
gene id G287334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65769192 ~ 65769561 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU325763
TTGCATAGGGATCTGCTGTGTATACATACACTACTTCCTTTTGACTTGAGTTAGGGCACAGTGGATTTATTAATTCACAGGCGTTCTGTAAAACCTGAGGAAGCGAGGCTTGACATGAGTGACTCAGACACAGTTTATTTAGGAAATGAAGCATGTCATTGAACAACAGTGTTATGTCCTATCAGGATCCTATAACAGTTGAAATATAAAACTAAACAGTGTAAATCTCTGCTAAAGGCCTTGCCTGCAGTAGCCTACTAGTCATGATGTGGGGTAGATATCAGAAGAAGCTGGTgcgaggaggacgggctcattgtcatggctggaatggaataaacgGAACAGTATCAAACAAACATATGGAAAtgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325763 True 370 lncRNA 0.41 1 65769192 65769561

Neighbor

gene id symbol gene type direction distance location
LOC110520416 tbx15 coding upstream 132106 65614185 ~ 65637086 (+)
wars2 wars2 coding upstream 169329 65583035 ~ 65599863 (+)
popdc2 popdc2 coding upstream 265401 65491959 ~ 65503791 (+)
LOC110520411 NA coding upstream 278125 65489157 ~ 65491432 (+)
ift88 ift88 coding upstream 382486 65362736 ~ 65386706 (+)
LOC110520417 gdap2 coding downstream 7635 65777196 ~ 65813495 (+)
LOC118964312 LOC106586611 coding downstream 258072 66027633 ~ 66036299 (+)
LOC110504495 LOC106586612 coding downstream 338306 66107867 ~ 66161419 (+)
LOC110520426 LOC106582091 coding downstream 439552 66209113 ~ 66268815 (+)
LOC110520428 NA coding downstream 458838 66228399 ~ 66232190 (+)
G287309 NA non-coding upstream 12655 65756337 ~ 65756537 (+)
G287300 NA non-coding upstream 23846 65745022 ~ 65745346 (+)
G287297 NA non-coding upstream 29184 65739779 ~ 65740008 (+)
G287295 NA non-coding upstream 30233 65738726 ~ 65738959 (+)
G287281 NA non-coding upstream 42615 65725897 ~ 65726577 (+)
G287342 NA non-coding downstream 41009 65810570 ~ 65812016 (+)
G287383 NA non-coding downstream 90964 65860525 ~ 65861536 (+)
G287470 NA non-coding downstream 189625 65959186 ~ 66022656 (+)
G287513 ttf2 non-coding downstream 254882 66024443 ~ 66024967 (+)
zmym2 LOC106586592 other upstream 483636 65260200 ~ 65311166 (+)
LOC110520396 LOC100136409 other upstream 602612 65161342 ~ 65166580 (+)
G286679 NA other upstream 659555 65109256 ~ 65109637 (+)
G285763 NA other upstream 1461832 64306512 ~ 64307360 (+)
G285203 NA other upstream 1685210 64071432 ~ 64083982 (+)
G288252 NA other downstream 780261 66549822 ~ 66550487 (+)
G288430 NA other downstream 961725 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 1013812 66783373 ~ 66787442 (+)
G288674 NA other downstream 1223610 66993171 ~ 66994131 (+)

Expression


Co-expression Network